Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02293 and PFR28_02294 are separated by 138 nucleotidesPFR28_02294 and PFR28_02295 are separated by 381 nucleotidesPFR28_02295 and PFR28_02296 are separated by 30 nucleotidesPFR28_02296 and PFR28_02297 are separated by 131 nucleotides PFR28_02293: PFR28_02293 - Sigma54-dependent transcriptional activator SfnR, at 2,742,720 to 2,743,823 _02293 PFR28_02294: PFR28_02294 - FMNH(2)-dependent dimethylsulfone monooxygenase, at 2,743,962 to 2,745,059 _02294 PFR28_02295: PFR28_02295 - Dibenzothiophene desulfurization enzyme C, at 2,745,441 to 2,746,685 _02295 PFR28_02296: PFR28_02296 - Tryptophan-rich sensory protein, at 2,746,716 to 2,747,156 _02296 PFR28_02297: PFR28_02297 - hypothetical protein, at 2,747,288 to 2,747,872 _02297
Group Condition PFR28_02293 PFR28_02294 PFR28_02295 PFR28_02296 PFR28_02297
carbon source butyrate (C) 10 mM -0.5 +0.1 -0.2 -1.8 -0.4
carbon source Azelaic carbon 10 mM -0.3 -0.0 -0.2 -0.9 -0.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.0 -0.1 +0.0 -1.4 -0.0
carbon source L-Leucine (C) 10 mM -0.1 -0.4 -0.2 -0.5 -0.2
carbon source L-Leucine (C) 10 mM -0.2 -0.4 -0.2 -0.4 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.1 -0.3 -0.2 -0.4 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.0 -0.8 -0.5 -0.1 +0.1
carbon source Xanthosine (C) 10 mM -0.2 -0.2 -0.2 -0.5 -0.1
carbon source Glycocyamine 20 mM (C) -0.3 +0.0 +0.1 -0.8 -0.0
carbon source L-Malic (C) 10 mM -0.3 -0.2 +0.1 -0.6 +0.0
carbon source L-Valine (C) 10 mM +0.2 -0.4 -0.2 -0.2 +0.1
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.1 -0.4 -0.4 +0.0 +0.2
carbon source Betaine (C) +0.1 -0.9 +0.4 -0.1 +0.2
carbon source L-Lysine (C) 10 mM -0.1 +0.1 -0.2 -0.4 +0.3
carbon source Citric Acid (C) 10 mM +0.1 -0.4 -0.1 +0.3 -0.1
carbon source 4-Guanidinobutyric (C) +0.4 +0.1 -0.1 -0.7 +0.0
carbon source Vanillic Acid (C) 2.5 mM -0.3 +0.2 -0.2 +0.3 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 +0.5 +0.2 -0.8 +0.2
carbon source Guanosine (C) -0.2 +0.5 -0.2 -0.3 +0.2
carbon source D,L-Malic Acid (C) 10 mM +0.0 -0.4 -0.1 +0.7 -0.2
carbon source D-(+)-Galactosamine (C) 10 mM -0.0 -0.2 -0.1 +0.7 -0.2
carbon source butyrate (C) +0.2 -0.3 -0.1 +0.6 -0.1
carbon source methyl ferulate (C) +0.8 -0.3 -0.0 -0.1 +0.0
carbon source Guanosine (C) +0.3 -0.6 -0.3 +0.7 +0.3
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM +0.2 -0.5 +0.0 +0.4 +0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.3 +0.3 +0.3 -0.5 +0.1
carbon source Xanthosine (C) +0.2 -0.0 -0.3 +0.4 +0.2
carbon source methyl ferulate (C) +0.8 -0.2 -0.0 +0.2 +0.1
carbon source sn-glycero-3-phosphocholine (C) +0.0 +0.4 +0.1 +0.6 -0.0
carbon source methyl ferulate (C) +1.1 -0.3 +0.2 +0.3 +0.2
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