Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02257 and PFR28_02258 are separated by 2 nucleotidesPFR28_02258 and PFR28_02259 are separated by 78 nucleotidesPFR28_02259 and PFR28_02260 are separated by 324 nucleotidesPFR28_02260 and PFR28_02261 overlap by 4 nucleotides PFR28_02257: PFR28_02257 - Macrolide export ATP-binding/permease protein MacB, at 2,588,769 to 2,590,730 _02257 PFR28_02258: PFR28_02258 - Macrolide export protein MacA, at 2,590,733 to 2,591,884 _02258 PFR28_02259: PFR28_02259 - D-alanine--D-alanyl carrier protein ligase, at 2,591,963 to 2,622,895 _02259 PFR28_02260: PFR28_02260 - Gramicidin S synthase 2, at 2,623,220 to 2,636,392 _02260 PFR28_02261: PFR28_02261 - D-alanine--D-alanyl carrier protein ligase, at 2,636,389 to 2,665,455 _02261
Group Condition PFR28_02257 PFR28_02258 PFR28_02259 PFR28_02260 PFR28_02261
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -0.0 -0.4 -0.1
carbon source caffeic (C) 2.5 mM N.D. N.D. +0.0 -0.3 -0.1
carbon source caffeic (C) 2.5 mM N.D. N.D. -0.0 -0.3 -0.1
carbon source caffeic (C) 2.5 mM N.D. N.D. -0.0 -0.3 -0.1
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -0.0 -0.3 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. -0.1 -0.1 -0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM N.D. N.D. +0.1 -0.3 -0.1
carbon source Ferulic Acid (C) 2.5 mM N.D. N.D. -0.0 -0.3 -0.1
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. +0.0 -0.3 -0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM N.D. N.D. +0.0 -0.2 -0.1
carbon source Vanillic Acid (C) 2.5 mM N.D. N.D. +0.1 -0.3 -0.1
carbon source p-Coumaric (C) 2.5 mM N.D. N.D. +0.0 -0.3 -0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. +0.1 -0.3 -0.1
carbon source 4-Guanidinobutyric (C) 10 mM N.D. N.D. +0.1 +0.1 +0.1
carbon source L-pyroglutamic carbon 10 mM N.D. N.D. +0.2 +0.1 +0.1
carbon source D,L-Lactate carbon 20 mM N.D. N.D. +0.1 +0.1 +0.1
carbon source L-tyrosine (C) 10 mM N.D. N.D. +0.1 +0.1 +0.1
carbon source 4-Guanidinobutyric (C) 10 mM N.D. N.D. +0.1 +0.1 +0.1
carbon source D,L-Lactate carbon 20 mM N.D. N.D. +0.1 +0.1 +0.2
carbon source 4-Guanidinobutyric (C) 10 mM N.D. N.D. +0.1 +0.1 +0.2
carbon source L-pyroglutamic carbon 10 mM N.D. N.D. +0.1 +0.1 +0.2
carbon source octanoate (C) 10 mM N.D. N.D. +0.2 +0.1 +0.1
carbon source methyl-trans-p-coumarate (C) N.D. N.D. +0.4 +0.2 -0.0
carbon source L-tyrosine (C) 10 mM N.D. N.D. +0.1 +0.2 +0.2
carbon source methyl-trans-p-coumarate (C) N.D. N.D. +0.4 +0.1 +0.0
carbon source methyl-trans-p-coumarate (C) N.D. N.D. +0.3 +0.1 +0.1
carbon source L-Phenylalanine 5 mM (C) N.D. N.D. +0.1 +0.2 +0.3
carbon source L-Phenylalanine 5 mM (C) N.D. N.D. +0.1 +0.3 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. N.D. +0.3 +0.2 +0.2
carbon source L-Phenylalanine 5 mM (C) N.D. N.D. +0.1 +0.3 +0.3
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