Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02236 and PFR28_02237 overlap by 26 nucleotidesPFR28_02237 and PFR28_02238 are separated by 41 nucleotidesPFR28_02238 and PFR28_02239 are separated by 37 nucleotidesPFR28_02239 and PFR28_02240 overlap by 4 nucleotides PFR28_02236: PFR28_02236 - hypothetical protein, at 2,560,236 to 2,560,679 _02236 PFR28_02237: PFR28_02237 - hypothetical protein, at 2,560,654 to 2,561,181 _02237 PFR28_02238: PFR28_02238 - Putative mycofactocin radical SAM maturase MftC, at 2,561,223 to 2,562,404 _02238 PFR28_02239: PFR28_02239 - Siroheme synthase, at 2,562,442 to 2,563,281 _02239 PFR28_02240: PFR28_02240 - Nitrite reductase, at 2,563,278 to 2,564,774 _02240
Group Condition PFR28_02236 PFR28_02237 PFR28_02238 PFR28_02239 PFR28_02240
carbon source butyrate (C) 10 mM +0.0 -4.7 -0.0 -0.2 +0.1
carbon source D-Glucuronic (C) 10 mM -0.2 -1.8 -0.1 -0.1 -0.6
carbon source Betaine (C) 2.5 mM -1.9 +0.5 -0.1 -0.5 -0.0
carbon source butyrate (C) -0.8 -1.1 +0.1 +0.0 -0.3
carbon source D-Fructose (C) 10 mM -0.4 -1.0 -0.1 -0.0 -0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.0 -1.4 -0.1 -0.0 -0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.3 -1.1 -0.2 -0.1 +0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.5 -1.3 +0.2 -0.0 -0.0
carbon source D-Trehalose (C) 5 mM -0.6 -0.7 -0.2 +0.1 -0.2
stress D-Glucose (C); with Chloride 400 mM +0.2 -0.7 -0.2 -0.7 -0.3
carbon source Shikimic Acid (C) 10 mM -1.1 -0.1 +0.1 -0.1 -0.3
carbon source L-Glutamic (C) 10 mM -0.1 -1.0 -0.2 +0.1 -0.3
carbon source Inosine carbon 10 mM +0.1 -0.6 -0.1 -0.7 -0.2
carbon source Inosine carbon 10 mM +0.1 -1.8 +0.3 +0.1 -0.2
carbon source methyl ferulate (C) -0.0 -1.5 +0.1 +0.1 -0.1
carbon source caffeic (C) -0.2 -1.5 +0.3 +0.1 -0.0
carbon source L-Lactate (C) 10 mM +0.2 -0.5 +0.2 -0.6 -0.6
carbon source L-Lactate (C) 10 mM -0.4 +0.4 -0.4 -0.6 -0.3
carbon source 4-Guanidinobutyric (C) +0.4 -1.2 -0.2 +0.0 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM -0.4 -0.6 -0.2 +0.5 -0.3
carbon source Vanillic Acid (C) 2.5 mM +0.5 -0.6 -0.1 -0.2 -0.5
carbon source Guanosine (C) -0.3 -0.6 +0.0 +0.7 -0.6
carbon source sn-glycero-3-phosphocholine (C) +0.4 -1.0 +0.2 -0.2 +0.0
carbon source methyl-trans-p-coumarate (C) +0.3 -1.0 +0.4 -0.3 +0.1
carbon source Guanosine (C) +0.9 -0.1 -0.3 -0.4 -0.3
carbon source Azelaic carbon 10 mM -0.7 +0.6 +0.2 -0.4 +0.1
carbon source Vanillic Acid (C) 2.5 mM +0.3 +0.2 +0.3 -0.7 +0.2
carbon source trans-aconitic (C) +0.7 -0.2 +0.3 +0.3 -0.3
carbon source Cytidine carbon 10 mM +0.4 +0.7 +0.2 -0.4 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.4 +2.2 +0.1 +0.1 +0.4
remove
PFR28_02236
plot		 remove
PFR28_02237
plot		 remove
PFR28_02238		 remove
PFR28_02239
plot		 remove
PFR28_02240
plot