Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02210 and PFR28_02211 are separated by 170 nucleotidesPFR28_02211 and PFR28_02212 overlap by 1 nucleotidesPFR28_02212 and PFR28_02213 overlap by 7 nucleotidesPFR28_02213 and PFR28_02214 are separated by 10 nucleotides PFR28_02210: PFR28_02210 - cAMP-activated global transcriptional regulator CRP, at 2,537,837 to 2,538,514 _02210 PFR28_02211: PFR28_02211 - hypothetical protein, at 2,538,685 to 2,539,074 _02211 PFR28_02212: PFR28_02212 - Ubiquinone biosynthesis accessory factor UbiJ, at 2,539,074 to 2,539,544 _02212 PFR28_02213: PFR28_02213 - hypothetical protein, at 2,539,538 to 2,540,428 _02213 PFR28_02214: PFR28_02214 - putative protease YhbU, at 2,540,439 to 2,541,434 _02214
Group Condition PFR28_02210 PFR28_02211 PFR28_02212 PFR28_02213 PFR28_02214
carbon source Guanosine (C) +0.4 N.D. -5.8 +0.3 +0.1
carbon source Betaine (C) 2.5 mM -3.6 N.D. +0.1 -0.2 -0.1
carbon source D-Trehalose (C) 5 mM -1.1 N.D. -0.9 -0.6 -0.1
carbon source L-Malic (C) 10 mM -1.4 N.D. -0.9 -0.1 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM -1.7 N.D. -0.0 -0.2 -0.2
carbon source L-Glutamic carbon 10 mM -2.5 N.D. +0.4 -0.0 +0.1
carbon source L-Malic (C) 10 mM -1.3 N.D. -0.6 +0.1 -0.0
carbon source NAG (C) 10 mM -2.6 N.D. +0.8 -0.1 +0.1
carbon source Guanosine (C) -2.7 N.D. +0.5 +0.4 -0.0
carbon source D-Trehalose (C) 5 mM -1.7 N.D. +0.2 -0.2 -0.1
stress D-Glucose (C); with Chloride 200 mM -1.5 N.D. -0.3 +0.2 +0.1
carbon source L-Phenylalanine carbon 5 mM -0.9 N.D. +0.2 -0.8 +0.1
carbon source acetate (C) 30 mM -1.7 N.D. -0.1 +0.4 +0.0
carbon source D-Fructose carbon 10 mM -1.4 N.D. -0.4 +0.4 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +1.0 N.D. -2.2 +0.1 +0.1
carbon source D-Ribose carbon 10 mM -1.4 N.D. +0.1 +0.3 +0.2
carbon source D-Ribose (C) 10 mM -1.6 N.D. +0.4 +0.0 +0.2
carbon source D-Fructose (C) 10 mM -1.5 N.D. +0.7 +0.1 +0.1
carbon source propionate (C) 20 mM -1.2 N.D. +0.5 -0.1 +0.2
carbon source Vanillic Acid (C) 2.5 mM -1.1 N.D. -0.0 +0.6 +0.1
carbon source Vanillic Acid (C) 2.5 mM +0.1 N.D. -1.2 +0.4 +0.3
carbon source NAG (C) 10 mM -1.0 N.D. +0.5 +0.3 +0.1
carbon source D,L-Lactate (C) 20 mM -0.7 N.D. +1.0 -0.3 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.8 N.D. +0.3 +0.7 -0.1
carbon source L-Lactate (C) 10 mM +1.1 N.D. +0.6 -1.2 -0.0
carbon source Inosine (C) +1.0 N.D. -0.7 +0.2 -0.1
carbon source methyl ferulate (C) +0.9 N.D. -0.5 +0.5 +0.5
carbon source Cytidine (C) +1.2 N.D. -0.3 +0.6 +0.1
carbon source Inosine carbon 10 mM +0.5 N.D. +0.9 +0.5 +0.1
carbon source L-Hydroxyproline carbon 10 mM +0.6 N.D. +1.0 +0.7 +0.1
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