Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02197 and PFR28_02198 are separated by 98 nucleotidesPFR28_02198 and PFR28_02199 are separated by 278 nucleotidesPFR28_02199 and PFR28_02200 are separated by 100 nucleotidesPFR28_02200 and PFR28_02201 are separated by 143 nucleotides PFR28_02197: PFR28_02197 - hypothetical protein, at 2,525,034 to 2,525,705 _02197 PFR28_02198: PFR28_02198 - hypothetical protein, at 2,525,804 to 2,526,298 _02198 PFR28_02199: PFR28_02199 - L-aspartate/glutamate-specific racemase, at 2,526,577 to 2,527,269 _02199 PFR28_02200: PFR28_02200 - hypothetical protein, at 2,527,370 to 2,528,350 _02200 PFR28_02201: PFR28_02201 - Chaperone SurA, at 2,528,494 to 2,529,438 _02201
Group Condition PFR28_02197 PFR28_02198 PFR28_02199 PFR28_02200 PFR28_02201
carbon source Guanosine (C) +0.1 -1.7 -0.5 -0.2 -4.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 -0.7 -0.1 +0.1 -4.1
carbon source butyrate (C) 10 mM +0.6 -0.7 +0.3 +0.3 -4.5
carbon source butyrate (C) -0.3 +0.0 -0.1 -0.4 -3.1
carbon source 4-Guanidinobutyric (C) -0.4 -0.4 -0.1 +0.1 -2.9
carbon source Guanosine (C) +0.2 -0.5 -0.1 +0.0 -2.9
carbon source Cytidine (C) +0.1 -0.0 -0.7 -0.2 -2.5
carbon source butyrate (C) -0.1 -0.1 -0.5 -0.2 -2.4
carbon source Guanosine (C) +0.2 -0.5 -0.6 -0.2 -2.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.1 -0.5 -0.2 -0.3 -2.0
carbon source L-Malic (C) +0.3 -1.3 -0.4 -0.2 -1.1
carbon source methyl ferulate (C) +0.1 -1.0 -0.1 -0.3 -1.5
carbon source D-(+)-Galactosamine (C) 10 mM +0.1 +0.1 -0.1 -0.2 -2.7
carbon source octanoate (C) +0.1 -0.1 -0.2 +0.2 -2.3
carbon source Cytidine carbon 10 mM +0.2 -0.7 -0.7 -0.2 -1.0
carbon source L-Isoleucine carbon 10 mM -0.2 -0.3 -0.1 -0.1 -1.6
carbon source L-Malic (C) 10 mM -0.0 -0.3 +0.0 +0.1 -2.0
carbon source D-Xylose (C) 10 mM -0.1 +0.3 -0.0 -0.0 -2.5
carbon source L-Malic (C) +0.2 -0.1 -0.1 +0.0 -2.3
carbon source Xanthosine (C) +0.2 -0.8 -0.3 +0.0 -1.3
carbon source Choline chloride (C) -0.0 -0.2 -0.1 +0.0 -2.0
carbon source Betaine (C) +0.1 -0.1 -0.1 +0.2 -2.2
carbon source D-(+)-Galactosamine (C) 10 mM +0.2 +0.2 -0.5 -0.1 -1.7
carbon source sn-glycero-3-phosphocholine (C) +0.1 -0.1 -0.1 +0.1 -1.8
carbon source propionate carbon 20 mM -0.1 +0.3 -0.3 +0.1 -1.7
carbon source Glycocyamine 10 mM (C) +0.3 -0.5 +0.2 -0.4 -1.1
carbon source Inosine carbon 10 mM +0.4 -0.6 -0.2 +0.1 -1.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.3 +0.6 -0.8 -0.4 -0.2
carbon source Inosine carbon 10 mM +0.5 -0.1 -0.4 -0.3 +0.9
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.5 -0.5 -0.0 +0.3 +1.8
remove
PFR28_02197
plot		 remove
PFR28_02198
plot		 remove
PFR28_02199		 remove
PFR28_02200
plot		 remove
PFR28_02201
plot