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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_02191 and PFR28_02192 are separated by 284 nucleotides
PFR28_02192 and PFR28_02193 overlap by 4 nucleotides
PFR28_02193 and PFR28_02194 are separated by 199 nucleotides
PFR28_02194 and PFR28_02195 overlap by 4 nucleotides
PFR28_02191: PFR28_02191 - Short-chain-enoyl-CoA hydratase, at 2,513,923 to 2,514,735
_02191
PFR28_02192: PFR28_02192 - Cation efflux system protein CusC, at 2,515,020 to 2,516,495
_02192
PFR28_02193: PFR28_02193 - Multidrug resistance protein MdtC, at 2,516,492 to 2,519,596
_02193
PFR28_02194: PFR28_02194 - Multidrug resistance protein MdtB, at 2,519,796 to 2,522,891
_02194
PFR28_02195: PFR28_02195 - Multidrug resistance protein MdtA, at 2,522,888 to 2,524,189
_02195
Group
Condition
PFR28
_02191
PFR28
_02192
PFR28
_02193
PFR28
_02194
PFR28
_02195
carbon source
methyl-trans-p-coumarate (C)
-0.1
-0.7
-0.3
-0.6
-0.6
carbon source
methyl ferulate (C)
-0.1
-0.4
-0.6
-0.5
-0.7
carbon source
methyl ferulate (C)
-0.1
-0.2
-0.2
-0.4
-0.8
carbon source
methyl ferulate (C)
+0.1
-0.4
-0.5
-0.5
-0.5
carbon source
methyl-trans-p-coumarate (C)
-0.2
-0.0
-0.3
-0.4
-0.5
carbon source
Guanosine (C)
-0.1
-0.3
-0.4
-0.2
-0.2
carbon source
methyl-trans-p-coumarate (C)
+0.1
-0.3
-0.1
-0.5
-0.4
carbon source
L-Hydroxyproline (C) 10 mM
-0.2
-0.2
-0.1
-0.1
-0.3
carbon source
p-Coumaric (C)
+0.2
-0.3
-0.1
-0.2
-0.6
carbon source
sn-glycero-3-phosphocholine (C)
-0.2
-0.1
-0.2
-0.2
-0.2
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
+0.2
-0.3
-0.3
-0.3
-0.1
carbon source
Inosine (C)
+0.2
-0.1
-0.3
-0.2
-0.3
mixed carbon source
mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM
+0.1
-0.2
-0.2
-0.3
-0.2
carbon source
propionate (C) 20 mM
+0.1
-0.3
-0.2
-0.1
-0.2
carbon source
L-Lactate (C) 10 mM
-0.1
+0.3
-0.2
-0.1
-0.6
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.2
+0.2
+0.1
-0.1
-0.6
carbon source
4-Acetoxy-3-methoxycinnamic (C)
+0.0
+0.1
-0.0
+0.0
-0.7
carbon source
Guanosine (C)
+0.5
-0.0
+0.0
-0.1
-0.8
carbon source
D-(+)-Galactosamine (C) 10 mM
+0.3
+0.1
-0.0
-0.2
-0.5
carbon source
caffeic (C)
+0.3
-0.2
+0.1
-0.1
-0.4
carbon source
L-Lysine (C) 10 mM
+0.2
-0.2
+0.2
-0.1
-0.3
carbon source
Vanillic Acid (C) 2.5 mM
-0.1
+0.3
+0.3
-0.1
-0.5
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.1
+0.1
+0.3
-0.3
+0.2
carbon source
D,L-Malic Acid (C) 10 mM
+0.4
-0.2
+0.2
+0.1
+0.1
carbon source
butyrate (C) 10 mM
+0.3
+0.1
+0.1
-0.1
+0.3
carbon source
L-Carnitine (C) 10 mM
+0.2
-0.1
+0.0
+0.2
+0.4
carbon source
D-Glucose carbon 10 mM
+0.1
+0.1
+0.1
+0.2
+0.3
carbon source
Inosine carbon 10 mM
+0.3
+0.2
-0.0
-0.0
+0.4
carbon source
butyrate (C) 10 mM
+0.1
-0.0
+0.1
+0.1
+0.7
carbon source
D-Glucose carbon 10 mM
+0.0
+0.2
+0.1
+0.2
+0.5
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