Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02143 and PFR28_02144 are separated by 11 nucleotidesPFR28_02144 and PFR28_02145 are separated by 549 nucleotidesPFR28_02145 and PFR28_02146 are separated by 8 nucleotidesPFR28_02146 and PFR28_02147 overlap by 4 nucleotides PFR28_02143: PFR28_02143 - Haloalkane dehalogenase, at 2,462,759 to 2,463,787 _02143 PFR28_02144: PFR28_02144 - Formate dehydrogenase, mitochondrial, at 2,463,799 to 2,464,761 _02144 PFR28_02145: PFR28_02145 - Glycogen synthase, at 2,465,311 to 2,466,882 _02145 PFR28_02146: PFR28_02146 - 1,4-alpha-glucan branching enzyme GlgB, at 2,466,891 to 2,468,693 _02146 PFR28_02147: PFR28_02147 - 4-alpha-glucanotransferase, at 2,468,690 to 2,470,768 _02147
Group Condition PFR28_02143 PFR28_02144 PFR28_02145 PFR28_02146 PFR28_02147
carbon source methyl-trans-p-coumarate (C) +0.0 +0.2 -1.7 -0.3 -2.0
carbon source methyl-trans-p-coumarate (C) +0.1 +0.0 -1.3 -0.2 -1.9
carbon source methyl ferulate (C) -0.2 -0.2 -1.2 -0.2 -1.3
carbon source methyl ferulate (C) -0.1 -0.2 -1.2 -0.6 -0.9
carbon source caffeic (C) -0.1 -0.4 -1.4 -0.2 -0.9
carbon source methyl ferulate (C) +0.1 -0.0 -1.2 -0.5 -1.1
carbon source L-Carnitine 10 mM (C) +0.1 -0.2 -1.7 -0.4 -0.6
carbon source caffeic (C) -0.0 -0.2 -1.4 -0.2 -0.9
carbon source methyl-trans-p-coumarate (C) +0.2 +0.3 -1.5 -0.2 -1.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 -0.4 -0.8 -0.1 -1.1
carbon source L-Carnitine 10 mM (C) -0.0 +0.1 -1.7 -0.2 -0.6
carbon source L-Phenylalanine 5 mM (C) +0.1 +0.0 -1.7 -0.3 -0.6
carbon source caffeic (C) -0.1 +0.1 -1.5 -0.3 -0.7
carbon source L-Carnitine 10 mM (C) +0.0 -0.1 -1.7 -0.1 -0.6
carbon source L-Phenylalanine 5 mM (C) -0.0 -0.0 -1.5 -0.3 -0.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.1 -0.3 -0.6 -0.4 -0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.0 +0.6 +1.1 -1.3 -2.5
carbon source L-Phenylalanine 5 mM (C) +0.1 +0.2 -1.6 -0.3 -0.4
carbon source octanoate (C) -0.0 +0.2 -1.0 -0.3 -0.9
carbon source Guanosine (C) -0.4 -0.1 -0.6 -0.3 -0.7
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 -0.2 -0.7 -0.2 -0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.1 -0.1 -1.3 -0.2 -0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.0 +0.1 -1.7 -0.1 +0.0
carbon source L-tyrosine 5 mM (C) +0.2 +0.0 -1.3 -0.2 -0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.1 +0.1 -1.1 -0.2 -0.4
carbon source Guanosine (C) +0.2 +0.0 -0.9 +0.2 -0.8
carbon source Cytidine (C) -0.1 -0.1 +1.6 +0.0 -0.3
carbon source Cytidine carbon 10 mM -0.1 +0.1 +1.6 -0.1 -0.1
carbon source Cytidine (C) -0.1 -0.0 +1.7 +0.1 -0.3
carbon source Cytidine (C) -0.1 +0.0 +1.7 +0.1 -0.3
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