Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02134 and PFR28_02135 are separated by 53 nucleotidesPFR28_02135 and PFR28_02136 are separated by 49 nucleotidesPFR28_02136 and PFR28_02137 overlap by 4 nucleotidesPFR28_02137 and PFR28_02138 overlap by 8 nucleotides PFR28_02134: PFR28_02134 - HTH-type transcriptional regulator CysB, at 2,455,010 to 2,455,921 _02134 PFR28_02135: PFR28_02135 - hypothetical protein, at 2,455,975 to 2,457,015 _02135 PFR28_02136: PFR28_02136 - hypothetical protein, at 2,457,065 to 2,457,214 _02136 PFR28_02137: PFR28_02137 - Acetylornithine deacetylase, at 2,457,211 to 2,458,398 _02137 PFR28_02138: PFR28_02138 - hypothetical protein, at 2,458,391 to 2,459,065 _02138
Group Condition PFR28_02134 PFR28_02135 PFR28_02136 PFR28_02137 PFR28_02138
carbon source Cytidine (C) -0.3 -0.1 -1.8 -0.2 -0.1
carbon source Inosine (C) -0.2 -0.1 -0.5 -0.2 -0.9
carbon source pyruvate (C) -0.1 -0.2 -0.4 -0.3 -0.9
carbon source butyrate (C) +0.2 -0.1 -0.5 -0.2 -1.2
carbon source D,L-Malic Acid (C) 10 mM +0.1 -0.1 -0.9 +0.1 -0.7
carbon source L-Lactate (C) 10 mM +0.1 -0.1 -0.3 -0.4 -0.7
carbon source Azelaic carbon 10 mM +0.2 -0.2 -1.0 -0.3 -0.2
carbon source Adenosine (C) 10 mM -0.3 -0.2 +0.2 -0.1 -0.9
carbon source methyl ferulate (C) +0.1 -0.2 -1.0 -0.1 -0.0
carbon source butyrate (C) 10 mM -0.2 +0.1 -1.1 +0.1 +0.0
carbon source a-Ketoglutaric carbon 10 mM +0.1 -0.1 -0.7 +0.2 -0.5
carbon source Glycocyamine 20 mM (C) -0.6 -0.2 -0.7 +0.0 +0.4
carbon source L-tyrosine (C) 10 mM -0.4 -0.2 +0.3 +0.2 -0.6
carbon source Guanosine (C) +0.1 -0.0 -0.9 +0.3 -0.1
carbon source D-Trehalose (C) 5 mM -0.3 -0.2 -0.6 -0.0 +0.7
carbon source Glycocyamine 20 mM (C) +0.2 +0.0 -1.4 -0.1 +0.8
stress D-Glucose (C); with Chloride 400 mM +0.1 -0.1 +0.4 -0.2 -0.6
carbon source L-tyrosine 5 mM (C) -0.1 -0.1 -0.6 +0.1 +0.5
carbon source succinate (C) -0.1 -0.1 +0.7 -0.2 -0.4
carbon source p-Coumaric (C) 2.5 mM -0.0 -0.0 +0.9 +0.0 -0.8
carbon source Vanillic Acid (C) 2.5 mM +0.1 -0.0 +0.8 -0.1 -0.7
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.1 +0.6 +0.8 -1.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.3 +0.1 +1.0 -0.2 -0.4
carbon source L-Phenylalanine carbon 5 mM +0.1 -0.1 +0.6 +0.2 -0.6
carbon source methyl-trans-p-coumarate (C) +0.3 +0.0 +0.7 -0.3 -0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.2 +0.1 +1.1 +0.1 -0.4
carbon source sn-glycero-3-phosphocholine (C) +0.5 +0.0 +0.5 -0.1 -0.3
carbon source L-Valine (C) 10 mM +0.1 +0.1 +0.9 -0.1 +0.3
carbon source Guanosine (C) -0.2 +0.1 +1.1 +0.3 +0.3
carbon source Betaine (C) +0.0 -0.0 +0.6 +0.5 +0.7
remove
PFR28_02134
plot
remove
PFR28_02135
plot
remove
PFR28_02136
remove
PFR28_02137
plot
remove
PFR28_02138
plot