Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02066 and PFR28_02067 are separated by 204 nucleotidesPFR28_02067 and PFR28_02068 overlap by 1 nucleotidesPFR28_02068 and PFR28_02069 overlap by 32 nucleotidesPFR28_02069 and PFR28_02070 are separated by 122 nucleotides PFR28_02066: PFR28_02066 - Multidrug resistance protein MdtA, at 2,341,742 to 2,342,935 _02066 PFR28_02067: PFR28_02067 - MltA-interacting protein, at 2,343,140 to 2,343,961 _02067 PFR28_02068: PFR28_02068 - Transcriptional regulatory protein QseB, at 2,343,961 to 2,344,647 _02068 PFR28_02069: PFR28_02069 - Adaptive-response sensory-kinase SasA, at 2,344,616 to 2,345,980 _02069 PFR28_02070: PFR28_02070 - HTH-type transcriptional repressor ComR, at 2,346,103 to 2,346,714 _02070
Group Condition PFR28_02066 PFR28_02067 PFR28_02068 PFR28_02069 PFR28_02070
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 -1.2 -0.4 +0.5 -1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.8 -0.3 -0.6 -0.2 +0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.0 -0.1 +0.0 -0.4 -1.2
carbon source sn-glycero-3-phosphocholine (C) -0.3 -0.0 -1.1 -0.1 -0.0
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.1 -0.2 +0.1 -0.3 -0.9
carbon source p-Coumaric (C) 2.5 mM -0.3 +0.1 +0.1 +0.0 -1.0
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.1 +0.0 -0.0 -0.9
carbon source Guanosine (C) -0.3 -0.2 -0.2 -0.4 +0.1
carbon source Ferulic Acid (C) 2.5 mM -0.0 -0.0 +0.1 -0.2 -0.8
carbon source p-Coumaric (C) 2.5 mM -0.1 -0.1 +0.2 -0.2 -0.8
carbon source Ferulic Acid (C) 2.5 mM -0.1 +0.1 +0.1 -0.2 -0.8
carbon source p-Coumaric (C) 2.5 mM -0.1 -0.0 +0.5 -0.3 -0.9
carbon source Ferulic Acid (C) 2.5 mM -0.2 -0.1 +0.4 -0.1 -0.9
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.1 +0.1 +0.4 -0.1 -1.0
carbon source caffeic (C) 2.5 mM -0.4 +0.0 +0.4 -0.1 -0.8
carbon source caffeic (C) 2.5 mM -0.5 -0.0 +0.5 +0.1 -0.9
carbon source Quinic Acid (C) 10 mM -0.3 +0.0 -0.7 +0.1 +0.0
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.0 -0.1 +0.5 -0.2 -1.0
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.2 +0.7 +0.4 -1.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.0 +0.0 +0.4 +0.1 -1.0
carbon source Betaine (C) -0.2 -0.3 +0.3 -0.2 -0.2
carbon source caffeic (C) 2.5 mM -0.1 -0.0 +0.5 -0.2 -0.8
carbon source Inosine carbon 10 mM +0.4 +0.3 -1.0 -0.0 +0.2
carbon source Vanillic Acid (C) 2.5 mM +0.2 +0.1 +0.4 +0.1 -0.6
carbon source Glycocyamine 20 mM (C) -0.4 +0.1 +0.5 -0.1 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.0 -0.1 +1.0 +0.1 -0.7
carbon source p-Coumaric (C) +0.2 -0.1 +0.4 +0.2 -0.2
carbon source L-Lactate (C) 10 mM +0.1 -0.8 +0.5 +0.5 +0.3
carbon source butyrate (C) 10 mM -0.1 -0.3 +0.0 +0.4 +0.5
carbon source Guanosine (C) -0.0 +0.2 +0.6 -0.2 +0.2
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