Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_02053 and PFR28_02054 are separated by 4 nucleotidesPFR28_02054 and PFR28_02055 are separated by 30 nucleotidesPFR28_02055 and PFR28_02056 are separated by 181 nucleotidesPFR28_02056 and PFR28_02057 are separated by 4 nucleotides PFR28_02053: PFR28_02053 - putative GMC-type oxidoreductase, at 2,322,922 to 2,324,499 _02053 PFR28_02054: PFR28_02054 - 2-heptyl-3-hydroxy-4(1H)-quinolone synthase, at 2,324,504 to 2,325,616 _02054 PFR28_02055: PFR28_02055 - Anaerobic nitric oxide reductase transcription regulator NorR, at 2,325,647 to 2,327,668 _02055 PFR28_02056: PFR28_02056 - Myo-inositol 2-dehydrogenase, at 2,327,850 to 2,328,866 _02056 PFR28_02057: PFR28_02057 - 2-oxo-tetronate isomerase, at 2,328,871 to 2,329,662 _02057
Group Condition PFR28_02053 PFR28_02054 PFR28_02055 PFR28_02056 PFR28_02057
carbon source sn-glycero-3-phosphocholine (C) +0.2 +0.1 -0.2 -0.2 -2.7
carbon source L-Lactate (C) 10 mM -0.2 -0.3 -0.5 -0.4 -1.4
carbon source Inosine (C) +0.1 +0.1 -1.0 +0.2 -1.4
carbon source butyrate (C) +0.3 +0.1 -0.3 -0.4 -1.7
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.3 -0.4 -0.6 +0.2 -1.2
carbon source Vanillic Acid (C) 2.5 mM -0.3 -0.2 -0.7 -0.1 -0.3
carbon source L-Lactate (C) -0.0 -0.0 -0.7 -0.1 -0.8
carbon source butyrate (C) +0.1 -0.2 -0.6 +0.1 -1.0
carbon source Betaine (C) 2.5 mM -0.1 -0.2 -0.2 -0.2 -0.9
carbon source Adenosine (C) 10 mM -0.5 -0.0 -0.0 -0.2 -0.9
carbon source methyl ferulate (C) +0.0 +0.0 -0.7 -0.0 -0.9
carbon source Guanosine (C) -0.1 -0.1 -0.1 +0.2 -1.2
carbon source 4-Guanidinobutyric (C) 10 mM -0.1 -0.3 +0.2 -0.1 -0.9
carbon source L-tyrosine (C) 10 mM -0.1 -0.1 +0.2 -0.2 -1.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.7 +0.2 -1.1 +0.2 +0.1
carbon source L-Leucine (C) 10 mM -0.3 -0.1 +0.2 -0.2 -0.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.5 -0.0 -1.1 -0.1 -0.4
carbon source methyl-trans-p-coumarate (C) +0.2 +0.1 -0.7 +0.1 -0.6
carbon source Quinic Acid (C) +0.4 +0.1 -0.1 -0.1 -1.2
carbon source Betaine (C) +0.1 +0.1 -1.2 +0.2 -0.0
carbon source Azelaic carbon 10 mM +0.3 +0.1 -0.4 -0.1 -0.7
carbon source Guanosine (C) +1.1 +0.1 -0.7 -0.6 -0.5
carbon source butyrate (C) -0.4 +0.1 -0.8 -0.2 +0.7
carbon source Glycocyamine 10 mM (C) +0.5 +0.3 -0.5 -0.0 -0.6
carbon source butyrate (C) 10 mM -0.3 +0.0 +1.1 +0.0 -0.9
carbon source sn-glycero-3-phosphocholine (C) +0.8 -0.1 -0.3 -0.3 -0.2
carbon source Cytidine (C) +0.3 -0.1 -0.5 +0.1 +0.7
carbon source p-Coumaric (C) +0.1 -0.2 +0.4 -0.2 +0.7
carbon source Inosine (C) +0.3 -0.0 -0.5 +0.2 +0.9
carbon source Glycocyamine 20 mM (C) +0.5 +0.2 +0.4 -0.5 +0.9
remove
PFR28_02053
plot		 remove
PFR28_02054
plot		 remove
PFR28_02055		 remove
PFR28_02056
plot		 remove
PFR28_02057
plot