Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 385 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
PFR28_02019 and PFR28_02020 are separated by 38 nucleotides
PFR28_02020 and PFR28_02021 overlap by 4 nucleotides
PFR28_02021 and PFR28_02022 are separated by 28 nucleotides
PFR28_02022 and PFR28_02023 are separated by 61 nucleotides
PFR28_02019: PFR28_02019 - hypothetical protein, at 2,294,963 to 2,295,670
_02019
PFR28_02020: PFR28_02020 - FMNH(2)-dependent dimethylsulfone monooxygenase, at 2,295,709 to 2,296,878
_02020
PFR28_02021: PFR28_02021 - FMN reductase (NADH) RutF, at 2,296,875 to 2,297,435
_02021
PFR28_02022: PFR28_02022 - hypothetical protein, at 2,297,464 to 2,297,832
_02022
PFR28_02023: PFR28_02023 - 'Inosine-5'-monophosphate dehydrogenase' transl_table=11, at 2,297,894 to 2,298,883
_02023
Group
Condition
PFR28
_02019
PFR28
_02020
PFR28
_02021
PFR28
_02022
PFR28
_02023
carbon source
p-Coumaric (C)
-0.7
-0.1
-1.5
-0.2
-0.1
carbon source
L-Lactate (C) 10 mM
-0.4
-0.0
-1.8
-0.3
-0.2
carbon source
butyrate (C) 10 mM
-1.4
-0.4
-0.8
-0.1
+0.0
carbon source
4-Guanidinobutyric (C)
-0.5
-0.1
-1.3
-0.5
-0.1
carbon source
Cytidine (C)
-0.5
+0.0
-1.4
-0.0
-0.5
carbon source
D,L-Malic Acid (C) 10 mM
-0.6
-0.0
-1.2
-0.1
-0.2
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.7
-0.4
-0.7
-0.4
+0.2
carbon source
p-Coumaric (C)
-0.3
+0.2
-1.6
-0.3
+0.3
carbon source
methyl ferulate (C)
-0.2
-0.1
-1.5
+0.0
+0.1
carbon source
caffeic (C)
-0.4
+0.0
-1.0
-0.4
+0.2
carbon source
Uridine (C) 10 mM
-0.9
-0.5
+0.4
+0.0
-0.5
carbon source
Choline chloride (C)
+0.0
+0.1
-1.7
-0.1
+0.5
carbon source
Glycocyamine 20 mM (C)
+0.4
-0.3
-1.3
-0.3
+0.2
carbon source
butyrate (C)
+0.4
+0.2
-1.1
-0.4
-0.1
carbon source
Glycocyamine 10 mM (C)
-0.1
+0.1
-1.4
+0.2
+0.2
carbon source
Guanosine (C)
-0.1
+0.5
-0.8
+0.4
-0.8
carbon source
methyl-trans-p-coumarate (C)
-0.4
-0.2
+0.1
-0.7
+0.5
carbon source
Vanillic Acid (C) 2.5 mM
-0.4
-0.1
+0.5
-0.7
+0.1
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.5
-0.2
+0.7
-0.4
-0.3
carbon source
Guanosine (C)
+0.8
+0.1
-1.8
+0.5
-0.2
carbon source
L-Lactate (C) 10 mM
+0.2
+0.1
+0.2
-1.3
+0.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.8
+0.2
-0.3
-0.2
+0.6
carbon source
Shikimic Acid (C) 10 mM
+0.1
-0.1
+0.6
-0.5
-0.5
carbon source
L-Lysine (C) 10 mM
+0.7
-0.0
-1.1
-0.1
+0.2
carbon source
Inosine carbon 10 mM
-0.5
-0.2
+0.4
-0.3
+0.4
carbon source
Vanillic Acid (C) 2.5 mM
-0.2
+0.0
-0.9
+0.4
+0.4
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-1.1
+0.2
+0.4
+0.0
+0.5
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.5
-0.4
+1.7
-0.1
-0.5
carbon source
L-Hydroxyproline (C) 10 mM
+0.2
-0.1
+0.8
-0.2
+0.6
carbon source
Betaine (C)
+0.2
+0.2
+0.8
+0.1
+0.8
remove
PFR28_02019
plot
remove
PFR28_02020
plot
remove
PFR28_02021
remove
PFR28_02022
plot
remove
PFR28_02023
plot