Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_02009 and PFR28_02010 are separated by 131 nucleotidesPFR28_02010 and PFR28_02011 are separated by 179 nucleotidesPFR28_02011 and PFR28_02012 are separated by 26 nucleotidesPFR28_02012 and PFR28_02013 overlap by 4 nucleotides PFR28_02009: PFR28_02009 - HTH-type transcriptional regulator PgrR, at 2,281,275 to 2,282,153 _02009 PFR28_02010: PFR28_02010 - Esterase EstB, at 2,282,285 to 2,283,466 _02010 PFR28_02011: PFR28_02011 - hypothetical protein, at 2,283,646 to 2,284,794 _02011 PFR28_02012: PFR28_02012 - Multidrug resistance protein MdtA, at 2,284,821 to 2,285,987 _02012 PFR28_02013: PFR28_02013 - multidrug efflux RND transporter permease subunit OqxB10, at 2,285,984 to 2,289,160 _02013
Group Condition PFR28_02009 PFR28_02010 PFR28_02011 PFR28_02012 PFR28_02013
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -5.4 +0.1 +0.0 +0.1 +0.4
carbon source Xanthosine (C) 10 mM -3.2 -0.1 -0.0 +0.1 +0.0
carbon source Guanosine (C) -2.0 -0.7 +0.1 -0.1 +0.1
carbon source D,L-Malic Acid (C) -2.4 -0.0 -0.0 -0.2 +0.1
carbon source D-Ribose carbon 10 mM -1.5 -0.4 -0.0 -0.3 -0.1
carbon source sn-glycero-3-phosphocholine (C) 10 mM -2.4 -0.0 +0.0 +0.1 +0.1
carbon source 4-Guanidinobutyric (C) -1.9 -0.3 -0.2 +0.0 +0.2
carbon source D-Ribose (C) 10 mM -1.3 -0.6 -0.3 -0.1 +0.2
carbon source D-(+)-Galactosamine (C) 10 mM -1.0 -0.7 +0.2 -0.3 -0.0
carbon source butyrate (C) 10 mM -0.7 -0.4 +0.0 -0.7 -0.1
carbon source Uridine (C) 10 mM -1.5 -0.0 -0.1 -0.1 -0.1
carbon source D-Galacturonic Acid (C) 10 mM -2.0 +0.2 -0.1 +0.1 -0.0
carbon source Glycerol carbon 20 mM -1.5 -0.1 -0.1 -0.2 +0.1
carbon source propionate (C) 20 mM -1.5 +0.0 -0.1 -0.1 +0.2
carbon source D-(+)-Galactosamine (C) 10 mM -1.3 -0.4 -0.1 +0.1 +0.2
carbon source L-Hydroxyproline (C) 10 mM -1.5 -0.1 +0.2 -0.2 +0.2
carbon source Adenosine (C) 10 mM -1.6 +0.2 -0.2 -0.0 +0.2
carbon source p-Coumaric (C) 2.5 mM -1.3 -0.2 +0.2 -0.1 +0.0
carbon source D-Glucose (C) 10 mM -1.6 +0.1 -0.0 +0.0 +0.2
carbon source L-Hydroxyproline (C) 10 mM -1.4 -0.1 +0.1 -0.1 +0.3
carbon source acetate (C) 30 mM -1.6 -0.1 +0.2 +0.0 +0.2
carbon source octanoate (C) 10 mM -1.2 -0.1 -0.2 +0.1 +0.2
carbon source L-Leucine (C) 10 mM -1.1 +0.2 +0.2 +0.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +1.0 -0.6 -0.2 +0.0 -0.1
carbon source D-Glucosamine Hydrochloride (C) 10 mM +0.4 -0.7 +0.2 +0.3 +0.2
carbon source Guanosine (C) -0.5 +0.8 +0.0 +0.4 -0.0
carbon source Guanosine (C) +0.9 +0.7 -0.1 -0.3 -0.1
carbon source L-Phenylalanine carbon 5 mM +1.2 +0.1 -0.2 +0.2 +0.3
carbon source butyrate (C) 10 mM +1.1 +0.7 -0.3 +0.1 +0.2
carbon source L-Isoleucine carbon 10 mM +1.3 +0.1 +0.2 -0.0 +0.2
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