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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_01824 and PFR28_01825 are separated by 145 nucleotides
PFR28_01825 and PFR28_01826 are separated by 21 nucleotides
PFR28_01826 and PFR28_01827 are separated by 54 nucleotides
PFR28_01827 and PFR28_01828 are separated by 49 nucleotides
PFR28_01824: PFR28_01824 - hypothetical protein, at 2,047,730 to 2,048,206
_01824
PFR28_01825: PFR28_01825 - hypothetical protein, at 2,048,352 to 2,049,245
_01825
PFR28_01826: PFR28_01826 - Citrate transporter, at 2,049,267 to 2,049,860
_01826
PFR28_01827: PFR28_01827 - Mg(2+)/citrate complex secondary transporter, at 2,049,915 to 2,050,574
_01827
PFR28_01828: PFR28_01828 - hypothetical protein, at 2,050,624 to 2,050,947
_01828
Group
Condition
PFR28
_01824
PFR28
_01825
PFR28
_01826
PFR28
_01827
PFR28
_01828
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
N.D.
-0.5
+0.2
-2.1
+0.5
carbon source
Uridine (C) 10 mM
N.D.
-0.3
+0.0
-1.1
-0.6
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
N.D.
-0.3
+0.1
-1.5
-0.2
carbon source
methyl-trans-p-coumarate (C)
N.D.
-0.4
-0.1
-0.3
-1.1
carbon source
methyl-trans-p-coumarate (C)
N.D.
-1.7
-0.1
-0.2
+0.1
carbon source
L-Lactate (C) 10 mM
N.D.
+0.3
+0.5
-2.4
-0.2
carbon source
butyrate (C)
N.D.
-0.4
-0.0
-0.9
-0.2
carbon source
butyrate (C) 10 mM
N.D.
-0.2
+0.2
-0.8
-0.7
carbon source
Uridine (C) 10 mM
N.D.
-0.6
+0.1
-0.5
-0.5
carbon source
octanoate (C)
N.D.
-0.5
+0.1
-0.9
+0.2
carbon source
D-(+)-Galactosamine (C) 10 mM
N.D.
-0.9
-0.2
+0.2
-0.2
carbon source
L-Lactate (C) 10 mM
N.D.
-0.2
+0.2
-1.1
+0.0
carbon source
5-Aminovaleric carbon 10 mM
N.D.
-0.9
+0.2
+0.0
-0.4
carbon source
trans-aconitic (C)
N.D.
-0.4
-0.0
-0.9
+0.3
carbon source
4-Guanidinobutyric (C)
N.D.
-0.9
-0.2
-0.4
+0.3
carbon source
L-Hydroxyproline (C) 10 mM
N.D.
+0.2
-0.4
-0.8
+0.1
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
N.D.
-0.4
+0.3
-1.2
+0.3
carbon source
Ferulic Acid (C) 2.5 mM
N.D.
-0.6
+0.2
-0.6
+0.1
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
N.D.
+0.2
+0.2
-0.7
-0.6
carbon source
propionate carbon 20 mM
N.D.
-0.3
+0.3
-0.9
-0.0
carbon source
L-Carnitine (C) 10 mM
N.D.
-0.9
+0.2
-0.2
+0.1
carbon source
Choline (C) 10 mM
N.D.
-0.1
+0.6
-0.9
-0.2
carbon source
Glycocyamine 20 mM (C)
N.D.
-0.5
+0.1
-0.4
+0.4
carbon source
butyrate (C)
N.D.
+0.5
+0.4
-1.0
-0.1
carbon source
pyruvate (C)
N.D.
-0.3
+0.3
-0.5
+0.4
carbon source
Ferulic Acid (C) 2.5 mM
N.D.
-0.3
+0.1
-0.4
+0.6
carbon source
m-Inositol carbon 10 mM
N.D.
-0.5
+0.2
+0.5
-0.2
carbon source
2-Keto-D-gluconic hemicalcium salt (C) 10 mM
N.D.
+0.3
-0.4
+0.8
-0.3
carbon source
Guanosine (C)
N.D.
-0.8
+0.7
+0.7
-0.2
carbon source
Guanosine (C)
N.D.
+0.7
-0.0
+0.4
+0.4
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