Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01806 and PFR28_01807 overlap by 4 nucleotidesPFR28_01807 and PFR28_01808 are separated by 26 nucleotidesPFR28_01808 and PFR28_01809 are separated by 156 nucleotidesPFR28_01809 and PFR28_01810 are separated by 2 nucleotides PFR28_01806: PFR28_01806 - Linearmycin resistance ATP-binding protein LnrL, at 2,026,209 to 2,026,940 _01806 PFR28_01807: PFR28_01807 - Hydrazine synthase subunit beta, at 2,026,937 to 2,027,917 _01807 PFR28_01808: PFR28_01808 - hypothetical protein, at 2,027,944 to 2,029,110 _01808 PFR28_01809: PFR28_01809 - hypothetical protein, at 2,029,267 to 2,029,485 _01809 PFR28_01810: PFR28_01810 - hypothetical protein, at 2,029,488 to 2,030,747 _01810
Group Condition PFR28_01806 PFR28_01807 PFR28_01808 PFR28_01809 PFR28_01810
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.4 +0.2 -5.7 -4.3 -0.5
carbon source butyrate (C) 10 mM -0.4 -0.3 -5.0 -4.1 -0.7
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.3 -1.3 -0.3 -4.3 -0.7
carbon source L-Valine (C) 10 mM +0.1 +0.2 -4.5 -1.2 -0.3
carbon source sn-glycero-3-phosphocholine (C) -0.0 -0.1 -0.4 -4.5 -0.6
carbon source 4-Guanidinobutyric (C) -0.7 -0.1 -2.7 -1.6 +0.3
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 +0.3 -5.7 +0.9 +0.1
carbon source Fumarate (C) 20 mM -0.1 -0.3 -1.1 -2.0 -0.0
carbon source L-Hydroxyproline (C) 10 mM +0.3 +0.3 -1.0 -2.9 -0.2
carbon source methyl ferulate (C) -0.4 -0.0 -0.3 -2.1 -0.6
carbon source L-Isoleucine (C) 10 mM +0.1 +0.0 -0.5 -2.8 -0.2
carbon source NAG (C) 10 mM -0.6 -0.1 -0.6 -1.5 -0.5
carbon source Cytidine (C) -0.1 -0.5 -0.0 -1.9 -0.8
carbon source Uridine (C) 10 mM +0.0 -0.0 -0.1 -2.9 -0.1
carbon source L-Phenylalanine carbon 5 mM +0.5 -0.8 +0.5 -3.0 -0.3
carbon source Glycocyamine 10 mM (C) +0.1 +0.4 +0.1 -3.3 -0.3
carbon source NAG (C) 10 mM -0.3 +0.2 -0.5 -1.9 -0.5
carbon source L-Lactate (C) -1.4 -0.2 +0.9 -2.0 -0.3
carbon source L-pyroglutamic (C) 10 mM +0.4 +0.2 -0.6 -2.2 -0.1
carbon source L-Malic (C) +0.4 +0.2 -1.8 -0.8 -0.2
carbon source Glycocyamine 20 mM (C) +0.4 +0.8 -0.4 -3.2 +0.5
carbon source Guanosine (C) -0.3 +1.0 +0.6 -2.3 -0.9
carbon source p-Coumaric (C) +0.7 +0.1 -2.5 -0.1 +0.0
carbon source Shikimic Acid (C) 10 mM +0.5 -0.0 -0.3 -2.2 +0.2
carbon source Adenosine (C) 10 mM -0.1 +0.5 -0.2 -2.1 +0.2
stress D-Glucose (C); with Chloride 200 mM +0.3 -0.2 +0.7 -2.2 -0.2
carbon source p-Coumaric (C) +0.5 -0.6 +0.9 -2.3 +0.1
carbon source Glycocyamine 20 mM (C) +0.8 +0.6 -0.4 -1.9 +0.1
carbon source methyl-trans-p-coumarate (C) -1.0 -0.4 -0.5 +1.0 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.5 +0.6 +1.5 -0.7 +0.0
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