Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01774 and PFR28_01775 are separated by 25 nucleotidesPFR28_01775 and PFR28_01776 are separated by 233 nucleotidesPFR28_01776 and PFR28_01777 are separated by 55 nucleotidesPFR28_01777 and PFR28_01778 are separated by 120 nucleotides PFR28_01774: PFR28_01774 - hypothetical protein, at 1,993,114 to 1,993,464 _01774 PFR28_01775: PFR28_01775 - hypothetical protein, at 1,993,490 to 1,994,044 _01775 PFR28_01776: PFR28_01776 - 4-hydroxy-tetrahydrodipicolinate synthase, at 1,994,278 to 1,995,195 _01776 PFR28_01777: PFR28_01777 - putative trans-3-hydroxy-L-proline dehydratase, at 1,995,251 to 1,996,279 _01777 PFR28_01778: PFR28_01778 - Glutamine transport ATP-binding protein GlnQ, at 1,996,400 to 1,997,122 _01778
Group Condition PFR28_01774 PFR28_01775 PFR28_01776 PFR28_01777 PFR28_01778
carbon source L-Hydroxyproline carbon 10 mM -0.9 -0.2 -3.5 -4.0 -3.8
carbon source L-Hydroxyproline carbon 10 mM -0.2 +0.0 -4.5 -3.0 -4.3
carbon source L-Hydroxyproline (C) 10 mM -0.7 -0.1 -5.3 -3.0 -0.8
carbon source L-Hydroxyproline carbon 10 mM -0.4 -0.0 -4.6 -2.0 -2.6
carbon source L-Hydroxyproline (C) 10 mM +0.0 -0.2 -5.0 -3.8 -0.6
carbon source L-Hydroxyproline (C) 10 mM -0.3 -0.1 -4.7 -3.1 -0.2
carbon source L-Lysine (C) 10 mM -0.1 -0.6 -0.4 -3.6 -0.1
carbon source butyrate (C) -0.8 -0.2 -0.2 -3.7 +0.3
carbon source Choline chloride (C) -1.9 -0.0 -0.3 -1.6 +0.0
carbon source sn-glycero-3-phosphocholine (C) -0.6 +0.0 -0.6 -1.7 +0.1
carbon source L-Phenylalanine 5 mM (C) -0.6 -0.3 -0.0 -1.1 -0.6
carbon source D-(+)-Galactosamine (C) 10 mM -0.1 +0.1 +0.2 -2.2 -0.2
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.6 +0.1 +0.2 -1.9 -0.0
carbon source octanoate (C) +0.1 -0.2 -0.2 -1.4 -0.4
carbon source L-Carnitine (C) 10 mM -0.3 +0.2 -0.4 -1.4 +0.2
carbon source D-Trehalose (C) 5 mM +0.4 -0.1 -0.0 -1.5 -0.2
carbon source Choline (C) 10 mM +0.3 +0.5 -0.3 -2.0 -0.1
carbon source L-Lysine (C) 10 mM +0.3 +0.2 -0.2 -1.3 -0.4
carbon source D-(+)-Galactosamine (C) 10 mM -1.6 +0.3 +0.1 +0.2 -0.3
carbon source D-Mannose carbon 10 mM +0.4 -0.1 -0.2 -1.6 +0.1
carbon source L-Lactate (C) 10 mM +0.4 +0.4 +0.1 -2.4 +0.2
carbon source L-tyrosine (C) 10 mM +0.3 +0.3 -0.0 -2.0 +0.1
carbon source methyl-trans-p-coumarate (C) -1.3 +0.2 -0.4 +0.4 -0.3
carbon source Xanthosine (C) -0.6 -0.6 -0.2 +0.7 -0.2
carbon source D-(+)-Galactosamine (C) 10 mM +0.2 +0.4 -0.3 -1.2 +0.2
carbon source L-Lysine (C) 10 mM +0.7 +0.3 -0.1 -1.4 -0.1
carbon source Glycocyamine 20 mM (C) -1.5 +0.3 +0.5 +0.3 -0.2
carbon source L-Phenylalanine carbon 5 mM -1.1 +0.0 +0.2 +1.3 +0.5
carbon source butyrate (C) 10 mM -0.3 +1.0 +0.1 +1.3 -0.4
carbon source Betaine (C) -0.5 +0.4 +0.6 +1.8 +0.2
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