Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01685 and PFR28_01686 are separated by 366 nucleotidesPFR28_01686 and PFR28_01687 overlap by 4 nucleotidesPFR28_01687 and PFR28_01688 are separated by 175 nucleotidesPFR28_01688 and PFR28_01689 are separated by 239 nucleotides PFR28_01685: PFR28_01685 - hypothetical protein, at 1,875,565 to 1,876,011 _01685 PFR28_01686: PFR28_01686 - hypothetical protein, at 1,876,378 to 1,876,902 _01686 PFR28_01687: PFR28_01687 - Nicotinamide riboside transporter PnuC, at 1,876,899 to 1,877,462 _01687 PFR28_01688: PFR28_01688 - Methyl-accepting chemotaxis protein McpP, at 1,877,638 to 1,879,272 _01688 PFR28_01689: PFR28_01689 - Undecaprenyl-diphosphatase, at 1,879,512 to 1,880,342 _01689
Group Condition PFR28_01685 PFR28_01686 PFR28_01687 PFR28_01688 PFR28_01689
carbon source Inosine carbon 10 mM -0.4 -0.8 +0.3 -0.2 -0.3
carbon source methyl-trans-p-coumarate (C) -0.3 -0.3 -0.2 -0.2 -0.4
carbon source butyrate (C) -0.2 -0.3 -0.3 -0.3 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.0 +0.8 -0.1 -0.3 -1.6
carbon source butyrate (C) 10 mM +0.1 -0.7 +0.2 +0.1 -0.8
carbon source Guanosine (C) +0.4 -0.7 -0.4 -0.4 +0.1
carbon source Betaine (C) -0.1 -0.4 +0.0 -0.6 +0.1
carbon source butyrate (C) 10 mM -0.4 +0.2 -0.2 -0.3 -0.3
carbon source 4-Aminobutyric carbon 10 mM -0.1 -0.8 -0.2 -0.0 +0.2
carbon source octanoate (C) +0.0 -0.8 -0.3 +0.1 +0.2
carbon source trans-aconitic (C) +0.4 -1.1 -0.0 +0.0 +0.2
carbon source Guanosine (C) +0.2 -0.5 -0.4 -0.2 +0.4
carbon source Glycocyamine 10 mM (C) -0.2 -0.5 +0.2 -0.2 +0.3
carbon source Glycocyamine 10 mM (C) +0.0 -0.9 +0.1 +0.1 +0.3
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.4 -0.4 -0.2 -0.2 +0.3
carbon source caffeic (C) 2.5 mM +0.1 -0.4 +0.1 -0.2 +0.5
carbon source L-Lactate (C) 10 mM +0.5 -0.2 +0.3 -0.2 -0.3
carbon source Vanillic Acid (C) 2.5 mM +0.3 -0.5 -0.0 -0.1 +0.5
carbon source Inosine carbon 10 mM +0.6 +0.2 -0.1 -0.2 -0.2
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.3 -0.3 -0.0 -0.2 +0.5
carbon source methyl-trans-p-coumarate (C) +0.4 -0.5 +0.3 -0.2 +0.2
carbon source caffeic (C) 2.5 mM +0.2 -0.1 +0.3 -0.3 +0.4
carbon source p-Coumaric (C) 2.5 mM +0.1 -0.1 +0.1 -0.3 +0.7
carbon source Vanillic Acid (C) 2.5 mM -0.1 +0.5 +0.3 -0.4 +0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 +0.3 +0.2 -0.2 +0.6
carbon source p-Coumaric (C) 2.5 mM +0.3 -0.0 +0.2 -0.3 +0.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 +0.4 +0.3 -0.3 +0.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.1 -0.1 +0.2 -0.3 +1.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.4 -0.1 +0.4 -0.4 +1.1
carbon source Vanillic Acid (C) 2.5 mM +0.5 +0.6 +0.3 -0.3 +0.6
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PFR28_01685
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