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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_01636 and PFR28_01637 are separated by 25 nucleotides
PFR28_01637 and PFR28_01638 are separated by 341 nucleotides
PFR28_01638 and PFR28_01639 are separated by 31 nucleotides
PFR28_01639 and PFR28_01640 overlap by 4 nucleotides
PFR28_01636: PFR28_01636 - Chaperone SurA, at 1,818,165 to 1,819,118
_01636
PFR28_01637: PFR28_01637 - 'GTP 3',8-cyclase' transl_table=11, at 1,819,144 to 1,820,136
_01637
PFR28_01638: PFR28_01638 - Anaerobic ribonucleoside-triphosphate reductase, at 1,820,478 to 1,822,493
_01638
PFR28_01639: PFR28_01639 - hypothetical protein, at 1,822,525 to 1,822,686
_01639
PFR28_01640: PFR28_01640 - 7-carboxy-7-deazaguanine synthase, at 1,822,683 to 1,823,378
_01640
Group
Condition
PFR28
_01636
PFR28
_01637
PFR28
_01638
PFR28
_01639
PFR28
_01640
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.8
-0.5
-0.1
N.D.
N.D.
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.8
-0.1
-0.1
N.D.
N.D.
carbon source
NAG (C) 10 mM
-0.4
-0.4
+0.0
N.D.
N.D.
carbon source
Glycocyamine 10 mM (C)
-0.6
-0.2
-0.0
N.D.
N.D.
carbon source
Xanthosine (C)
-0.8
+0.1
+0.1
N.D.
N.D.
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.2
-0.7
-0.1
N.D.
N.D.
carbon source
Ferulic Acid (C) 2.5 mM
+0.1
-0.5
-0.3
N.D.
N.D.
carbon source
Guanosine (C)
-0.5
-0.2
+0.2
N.D.
N.D.
carbon source
butyrate (C) 10 mM
-0.9
+0.4
-0.0
N.D.
N.D.
carbon source
Vanillic Acid (C) 2.5 mM
+0.2
-0.4
-0.2
N.D.
N.D.
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
+0.6
-0.1
-0.4
N.D.
N.D.
carbon source
Vanillic Acid (C) 2.5 mM
+0.6
-0.4
+0.0
N.D.
N.D.
carbon source
Betaine (C) 2.5 mM
+0.5
-0.2
-0.1
N.D.
N.D.
carbon source
Glycocyamine 10 mM (C)
+0.5
-0.3
+0.1
N.D.
N.D.
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
+0.7
-0.0
-0.2
N.D.
N.D.
carbon source
octanoate (C)
+0.5
-0.2
+0.2
N.D.
N.D.
carbon source
Guanosine (C)
+0.4
+0.4
-0.2
N.D.
N.D.
carbon source
sn-glycero-3-phosphocholine (C)
+0.6
-0.3
+0.3
N.D.
N.D.
carbon source
D-Trehalose (C) 5 mM
+0.7
-0.1
+0.1
N.D.
N.D.
carbon source
Inosine (C)
+0.3
+0.5
-0.1
N.D.
N.D.
carbon source
Xanthosine (C)
+0.5
+0.3
-0.1
N.D.
N.D.
carbon source
4-Acetoxy-3-methoxycinnamic (C)
+0.6
+0.1
+0.2
N.D.
N.D.
carbon source
4-Acetoxy-3-methoxycinnamic (C)
+0.5
+0.1
+0.1
N.D.
N.D.
carbon source
sn-glycero-3-phosphocholine (C)
+0.2
+0.6
+0.0
N.D.
N.D.
carbon source
trans-aconitic (C)
+0.3
+0.5
+0.1
N.D.
N.D.
carbon source
L-Carnitine (C)
+0.4
+0.4
+0.1
N.D.
N.D.
carbon source
butyrate (C)
+0.4
+0.5
+0.1
N.D.
N.D.
carbon source
L-Malic (C)
+0.5
+0.4
+0.1
N.D.
N.D.
carbon source
methyl-trans-p-coumarate (C)
+0.4
+0.5
+0.1
N.D.
N.D.
carbon source
methyl-trans-p-coumarate (C)
+0.5
+0.6
+0.2
N.D.
N.D.
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