Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01610 and PFR28_01611 are separated by 91 nucleotidesPFR28_01611 and PFR28_01612 are separated by 499 nucleotidesPFR28_01612 and PFR28_01613 overlap by 4 nucleotidesPFR28_01613 and PFR28_01614 are separated by 56 nucleotides PFR28_01610: PFR28_01610 - hypothetical protein, at 1,784,418 to 1,785,365 _01610 PFR28_01611: PFR28_01611 - hypothetical protein, at 1,785,457 to 1,785,912 _01611 PFR28_01612: PFR28_01612 - hypothetical protein, at 1,786,412 to 1,786,960 _01612 PFR28_01613: PFR28_01613 - Sialic acid TRAP transporter large permease protein SiaM, at 1,786,957 to 1,788,237 _01613 PFR28_01614: PFR28_01614 - hypothetical protein, at 1,788,294 to 1,789,313 _01614
Group Condition PFR28_01610 PFR28_01611 PFR28_01612 PFR28_01613 PFR28_01614
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.1 N.D. -0.7 +0.1 -0.5
carbon source Azelaic carbon 10 mM -1.8 N.D. +0.0 +0.2 -0.6
carbon source Shikimic Acid carbon 10 mM -0.1 N.D. -0.4 -0.6 -0.9
carbon source Shikimic Acid carbon 10 mM -0.1 N.D. -0.6 -0.3 -0.7
carbon source octanoate (C) -0.3 N.D. -0.2 -0.5 -0.6
carbon source Shikimic Acid carbon 10 mM +0.2 N.D. -0.6 -0.5 -0.5
carbon source Quinic Acid (C) +0.0 N.D. -0.4 -0.4 -0.5
carbon source Cytidine (C) -0.5 N.D. -0.3 -0.2 -0.2
carbon source Guanosine (C) -1.1 N.D. +0.3 -0.4 -0.0
carbon source 4-Guanidinobutyric (C) -0.6 N.D. -0.5 -0.2 +0.1
carbon source D-Trehalose (C) 5 mM -0.4 N.D. -0.1 -0.3 -0.4
carbon source Vanillic Acid (C) 2.5 mM -0.1 N.D. +0.1 -0.3 -0.8
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.6 N.D. +0.3 -0.0 -0.6
carbon source sn-glycero-3-phosphocholine (C) 10 mM -0.8 N.D. -0.2 -0.2 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.3 N.D. -0.5 -0.5 +0.0
carbon source p-Coumaric (C) 2.5 mM +0.2 N.D. +0.2 -0.5 -0.3
carbon source Guanosine (C) -0.1 N.D. -0.6 -0.3 +0.6
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.6 N.D. -0.3 -0.4 -0.2
carbon source Quinic Acid (C) +0.6 N.D. -0.6 -0.4 +0.1
carbon source D-Xylose (C) 10 mM -0.4 N.D. -0.3 +0.2 +0.4
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.5 N.D. +0.3 -0.3 -0.3
carbon source D,L-Malic Acid (C) +0.4 N.D. +0.0 -0.6 +0.2
carbon source L-Phenylalanine carbon 5 mM +0.3 N.D. +0.2 +0.1 -0.5
carbon source trans-aconitic (C) +0.3 N.D. +0.2 -0.4 +0.2
carbon source butyrate (C) +0.4 N.D. +0.1 -0.4 +0.2
carbon source Xanthosine (C) +0.0 N.D. +0.3 -0.3 +0.5
carbon source Glycocyamine 10 mM (C) +0.4 N.D. +0.3 -0.1 +0.3
carbon source methyl ferulate (C) +0.5 N.D. +0.3 -0.0 +0.3
carbon source Betaine (C) +0.6 N.D. -0.1 +0.1 +0.6
carbon source Glycocyamine 20 mM (C) +0.5 N.D. +0.0 +0.3 +0.5
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