Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01502 and PFR28_01503 are separated by 141 nucleotidesPFR28_01503 and PFR28_01504 are separated by 6 nucleotidesPFR28_01504 and PFR28_01505 are separated by 77 nucleotidesPFR28_01505 and PFR28_01506 are separated by 120 nucleotides PFR28_01502: PFR28_01502 - Narbonolide/10-deoxymethynolide synthase PikA2, modules 3 and 4, at 1,649,936 to 1,650,859 _01502 PFR28_01503: PFR28_01503 - hypothetical protein, at 1,651,001 to 1,651,558 _01503 PFR28_01504: PFR28_01504 - HTH-type transcriptional activator RhaR, at 1,651,565 to 1,652,509 _01504 PFR28_01505: PFR28_01505 - putative protein YesE, at 1,652,587 to 1,653,012 _01505 PFR28_01506: PFR28_01506 - putative HTH-type transcriptional regulator YahB, at 1,653,133 to 1,654,038 _01506
Group Condition PFR28_01502 PFR28_01503 PFR28_01504 PFR28_01505 PFR28_01506
carbon source butyrate (C) 10 mM -0.5 -0.4 -0.7 +0.2 -0.7
carbon source butyrate (C) -0.4 -0.0 -0.4 -0.4 -0.4
carbon source L-Lactate (C) -0.2 -0.3 -0.6 -0.5 -0.1
carbon source Guanosine (C) -0.7 +0.1 +0.1 -0.8 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.7 -0.1 -0.5 +0.3 -0.3
carbon source butyrate (C) -0.7 -0.3 -0.1 -0.4 -0.0
carbon source p-Coumaric (C) -0.6 +0.1 -0.9 +0.2 +0.1
carbon source Betaine (C) -0.6 -0.2 -0.7 +0.5 -0.2
carbon source L-Lysine (C) 10 mM +0.2 -0.3 -0.6 -0.2 -0.2
carbon source succinate (C) +0.2 -0.4 -0.3 -0.4 -0.1
carbon source Choline chloride (C) +0.2 +0.1 -0.3 -0.7 -0.3
carbon source Vanillic Acid (C) 2.5 mM -0.7 -0.0 -0.5 +0.2 +0.1
carbon source sn-glycero-3-phosphocholine (C) -0.2 +0.3 +0.1 -0.5 -0.4
carbon source D,L-Malic Acid (C) 10 mM +0.3 -0.3 +0.3 -0.5 -0.3
carbon source Inosine carbon 10 mM +0.3 -0.0 -1.0 +0.5 -0.2
carbon source methyl ferulate (C) -0.1 +0.2 +0.4 -0.4 -0.3
carbon source Cytidine carbon 10 mM -0.3 +0.3 +0.2 -0.5 +0.3
carbon source Inosine carbon 10 mM -0.2 -0.0 -0.6 +0.6 +0.2
carbon source D,L-Malic Acid (C) 10 mM +0.6 -0.2 -0.2 -0.3 +0.2
carbon source Glycocyamine 10 mM (C) +0.2 -0.7 +0.0 +0.4 +0.2
carbon source L-Malic (C) 10 mM +0.7 +0.2 -0.3 -0.2 -0.2
carbon source Uridine (C) 10 mM +0.3 -0.0 -0.5 +0.4 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.4 -0.3 +0.0 -0.0 +0.5
carbon source Xanthosine (C) +0.5 +0.1 +0.5 -0.2 -0.2
carbon source D-Ribose carbon 10 mM +0.2 -0.3 +0.5 +0.4 -0.2
carbon source Trisodium citrate 10 mM (C) +0.3 -0.1 -0.2 +0.4 +0.4
carbon source D-Glucuronic (C) 10 mM -0.1 -0.2 +0.2 +0.7 +0.2
carbon source Adenosine (C) 10 mM +0.4 -0.1 +0.2 +0.5 +0.1
carbon source Guanosine (C) +0.4 +0.5 -0.5 +0.7 +0.3
carbon source Glycocyamine 20 mM (C) +0.7 +0.3 +0.4 +0.2 -0.2
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