Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_01480 and PFR28_01481 are separated by 440 nucleotidesPFR28_01481 and PFR28_01482 overlap by 11 nucleotidesPFR28_01482 and PFR28_01483 are separated by 24 nucleotidesPFR28_01483 and PFR28_01484 are separated by 81 nucleotides PFR28_01480: PFR28_01480 - hypothetical protein, at 1,616,982 to 1,620,149 _01480 PFR28_01481: PFR28_01481 - hypothetical protein, at 1,620,590 to 1,620,796 _01481 PFR28_01482: PFR28_01482 - hypothetical protein, at 1,620,786 to 1,621,886 _01482 PFR28_01483: PFR28_01483 - Sensor histidine kinase RcsC, at 1,621,911 to 1,625,627 _01483 PFR28_01484: PFR28_01484 - Spermidine-binding periplasmic protein SpuE, at 1,625,709 to 1,626,782 _01484
Group Condition PFR28_01480 PFR28_01481 PFR28_01482 PFR28_01483 PFR28_01484
carbon source Vanillic Acid (C) 2.5 mM -0.1 N.D. -0.7 -0.5 -0.2
carbon source caffeic (C) +0.0 N.D. -0.3 -0.5 -0.4
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.0 N.D. -0.3 -0.4 -0.4
carbon source D,L-Malic Acid (C) 10 mM +0.0 N.D. -0.3 -0.6 +0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.3 N.D. +0.1 -0.5 -0.1
carbon source Azelaic carbon 10 mM -0.1 N.D. +0.3 -0.2 -0.5
carbon source p-Coumaric (C) +0.1 N.D. +0.3 -0.9 +0.0
carbon source Xanthosine (C) 10 mM -0.0 N.D. -0.2 -0.4 +0.3
carbon source Choline (C) 10 mM +0.0 N.D. -0.7 -0.0 +0.3
carbon source D-(+)-Galactosamine (C) 10 mM +0.1 N.D. -0.3 -0.5 +0.3
carbon source sn-glycero-3-phosphocholine (C) +0.0 N.D. +0.1 -0.8 +0.3
carbon source butyrate (C) +0.2 N.D. +0.1 -0.8 +0.3
carbon source Choline chloride (C) +0.0 N.D. -0.3 -0.4 +0.4
carbon source Glycerol (C) 20 mM -0.0 N.D. -0.6 +0.1 +0.5
carbon source methyl-trans-p-coumarate (C) +0.1 N.D. -0.2 -0.3 +0.4
carbon source Xanthosine (C) 10 mM -0.1 N.D. -0.3 -0.2 +0.5
carbon source L-Lysine (C) 10 mM -0.1 N.D. -0.1 -0.3 +0.6
carbon source 4-Guanidinobutyric (C) +0.0 N.D. -0.2 -0.2 +0.6
carbon source Xanthosine (C) +0.0 N.D. +0.4 -0.4 +0.3
carbon source Guanosine (C) +0.1 N.D. +0.3 -0.4 +0.3
carbon source L-Carnitine (C) +0.0 N.D. +0.3 -0.3 +0.4
carbon source Xanthosine (C) +0.2 N.D. -0.2 -0.1 +0.6
carbon source methyl-trans-p-coumarate (C) +0.1 N.D. -0.0 -0.2 +0.7
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.1 N.D. +0.0 -0.2 +0.7
carbon source D,L-Lactate (C) 20 mM +0.0 N.D. +0.2 -0.2 +0.6
carbon source Glycocyamine 10 mM (C) +0.0 N.D. -0.2 -0.0 +0.9
carbon source Glycocyamine 20 mM (C) -0.1 N.D. -0.0 -0.0 +1.0
carbon source D-Xylose carbon 10 mM +0.0 N.D. +0.1 +0.2 +0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.1 N.D. +0.1 +0.7 +0.1
carbon source Glycocyamine 20 mM (C) +0.0 N.D. +0.6 +0.4 +0.7
remove
PFR28_01480
plot		 remove
PFR28_01481
plot		 remove
PFR28_01482		 remove
PFR28_01483
plot		 remove
PFR28_01484
plot