Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01466 and PFR28_01467 overlap by 4 nucleotidesPFR28_01467 and PFR28_01468 overlap by 4 nucleotidesPFR28_01468 and PFR28_01469 are separated by 179 nucleotidesPFR28_01469 and PFR28_01470 are separated by 23 nucleotides PFR28_01466: PFR28_01466 - L-cystine transport system permease protein YecS, at 1,599,430 to 1,600,086 _01466 PFR28_01467: PFR28_01467 - L-cystine import ATP-binding protein TcyC, at 1,600,083 to 1,600,829 _01467 PFR28_01468: PFR28_01468 - Gamma-glutamylputrescine oxidoreductase, at 1,600,826 to 1,602,115 _01468 PFR28_01469: PFR28_01469 - Circadian clock protein kinase KaiC, at 1,602,295 to 1,603,734 _01469 PFR28_01470: PFR28_01470 - Transcriptional regulatory protein WalR, at 1,603,758 to 1,604,120 _01470
Group Condition PFR28_01466 PFR28_01467 PFR28_01468 PFR28_01469 PFR28_01470
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.9 +0.1 -1.2 -0.2 -0.1
carbon source p-Coumaric (C) -0.0 +0.1 +0.1 -0.4 -1.4
carbon source methyl-trans-p-coumarate (C) -0.0 -0.5 -0.5 -1.0 +0.4
carbon source Glycocyamine 20 mM (C) +0.2 -0.2 +0.1 -0.3 -0.9
carbon source D-Glucuronic (C) 10 mM +0.2 -0.1 -0.4 -0.2 -0.4
carbon source D-Trehalose (C) 5 mM -0.1 +0.2 -0.3 -0.6 -0.2
carbon source Guanosine (C) -0.1 -0.2 -0.7 -0.4 +0.4
carbon source D-Fructose carbon 10 mM +0.2 -0.0 -0.3 +0.0 -0.9
carbon source butyrate (C) 10 mM -0.1 -0.0 -0.6 +0.5 -0.7
carbon source Betaine (C) +0.1 +0.3 +0.7 -1.1 -1.0
carbon source D-Trehalose (C) 5 mM -0.2 +0.1 -0.7 -0.6 +0.5
carbon source methyl-trans-p-coumarate (C) -0.1 -0.3 -0.2 -0.8 +0.5
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.1 +0.2 -0.1 +0.0 -1.1
carbon source p-Coumaric (C) +0.2 +0.3 -0.0 -0.1 -1.2
carbon source Quinic Acid (C) +0.1 +0.2 -0.4 +0.1 -0.9
carbon source D-Fructose carbon 10 mM +0.2 +0.1 -0.3 +0.1 -0.8
carbon source Inosine carbon 10 mM +0.2 +0.1 +0.4 +0.1 -1.3
carbon source methyl-trans-p-coumarate (C) +0.0 -0.1 -0.0 -0.8 +0.5
carbon source trans-aconitic (C) 5 mM -0.4 -0.1 +0.1 -0.1 +0.7
carbon source caffeic (C) +0.2 -0.3 -0.2 -0.2 +0.7
carbon source Choline chloride (C) +0.1 -0.1 -0.3 -0.2 +0.8
carbon source Inosine (C) +0.3 +0.1 -0.5 +0.0 +0.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.1 -0.1 +0.2 -0.3 +0.8
carbon source butyrate (C) 10 mM -0.1 +0.2 +0.2 -0.4 +0.7
carbon source Choline chloride (C) -0.1 +0.1 +0.2 -0.2 +0.8
carbon source Vanillic Acid (C) 2.5 mM -0.2 +0.4 -0.1 -0.1 +0.9
carbon source sn-glycero-3-phosphocholine (C) +0.1 -0.2 -0.4 +0.2 +1.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.4 -0.3 +0.7 -0.2 +1.2
carbon source D,L-Malic Acid (C) -0.2 +0.2 -0.0 +0.0 +1.0
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.0 +0.1 +0.0 +1.2
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