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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_01444 and PFR28_01445 are separated by 99 nucleotides
PFR28_01445 and PFR28_01446 are separated by 342 nucleotides
PFR28_01446 and PFR28_01447 are separated by 279 nucleotides
PFR28_01447 and PFR28_01448 are separated by 393 nucleotides
PFR28_01444: PFR28_01444 - HTH-type transcriptional regulator DmlR, at 1,575,984 to 1,576,898
_01444
PFR28_01445: PFR28_01445 - hypothetical protein, at 1,576,998 to 1,577,297
_01445
PFR28_01446: PFR28_01446 - hypothetical protein, at 1,577,640 to 1,577,993
_01446
PFR28_01447: PFR28_01447 - hypothetical protein, at 1,578,273 to 1,578,836
_01447
PFR28_01448: PFR28_01448 - Benzoylformate decarboxylase, at 1,579,230 to 1,580,921
_01448
Group
Condition
PFR28
_01444
PFR28
_01445
PFR28
_01446
PFR28
_01447
PFR28
_01448
carbon source
Inosine carbon 10 mM
-1.2
-0.1
-0.3
-0.2
-0.1
carbon source
methyl-trans-p-coumarate (C)
-0.8
-0.4
-0.2
-0.2
-0.0
carbon source
D-Xylose (C) 10 mM
-0.7
+0.1
+0.0
-0.3
-0.4
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.5
-0.9
+0.3
+0.4
-0.5
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-2.0
+0.3
+0.7
-0.2
+0.5
carbon source
Guanosine (C)
-1.2
-0.1
+0.4
+0.2
+0.2
carbon source
Vanillic Acid (C) 2.5 mM
-0.7
-0.4
+0.3
+0.3
+0.1
carbon source
caffeic (C) 2.5 mM
-1.0
+0.1
+0.1
+0.3
-0.0
carbon source
Vanillic Acid (C) 2.5 mM
-1.0
+0.2
+0.4
+0.0
-0.0
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
-1.2
+0.7
+0.5
-0.3
-0.0
carbon source
D-Trehalose (C) 5 mM
-0.1
+0.2
+0.4
-0.3
-0.4
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.1
+0.7
-0.4
-0.2
-0.4
carbon source
Cytidine (C)
-0.9
+0.3
+0.3
+0.0
+0.1
carbon source
Glycocyamine 20 mM (C)
+0.5
+0.2
-0.3
-0.3
+0.1
carbon source
Uridine (C) 10 mM
-0.6
+0.3
+0.3
+0.2
+0.2
carbon source
p-Coumaric (C)
+0.7
-0.4
+0.1
+0.1
-0.2
carbon source
Xanthosine (C)
-0.7
+0.5
+0.3
+0.3
+0.0
carbon source
pyruvate (C)
-0.4
+0.4
+0.2
+0.3
-0.1
carbon source
Guanosine (C)
-0.9
+0.5
+0.4
+0.3
+0.3
carbon source
butyrate (C) 10 mM
+0.2
+0.4
+0.1
+0.5
-0.6
carbon source
Cytidine (C)
+0.8
+0.3
-0.3
-0.2
+0.1
carbon source
L-Carnitine (C) 10 mM
-0.2
+0.6
-0.2
+0.4
+0.1
carbon source
D,L-Malic Acid (C) 10 mM
-0.3
+0.3
+0.4
+0.1
+0.4
carbon source
Cytidine (C)
-0.6
+0.4
+0.4
+0.4
+0.3
carbon source
L-tyrosine (C) 10 mM
+0.5
+0.3
+0.4
+0.3
-0.1
carbon source
trans-aconitic (C)
+0.4
+0.5
+0.3
+0.1
+0.1
carbon source
Guanosine (C)
+0.7
+0.1
-0.1
+0.5
+0.5
carbon source
butyrate (C) 10 mM
+0.7
+0.1
+0.2
+0.6
+0.2
carbon source
L-Lactate (C) 10 mM
+0.7
+0.2
+0.4
+0.2
+0.3
carbon source
4-Acetoxy-3-methoxycinnamic (C)
+0.3
+0.7
+0.5
+0.0
+0.5
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