Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01435 and PFR28_01436 overlap by 4 nucleotidesPFR28_01436 and PFR28_01437 are separated by 237 nucleotidesPFR28_01437 and PFR28_01438 overlap by 16 nucleotidesPFR28_01438 and PFR28_01439 are separated by 1048 nucleotides PFR28_01435: PFR28_01435 - Response regulator UvrY, at 1,560,299 to 1,560,928 _01435 PFR28_01436: PFR28_01436 - hypothetical protein, at 1,560,925 to 1,563,921 _01436 PFR28_01437: PFR28_01437 - Sensor histidine kinase RcsC, at 1,564,159 to 1,567,056 _01437 PFR28_01438: PFR28_01438 - Cyclic di-GMP phosphodiesterase response regulator RpfG, at 1,567,041 to 1,568,093 _01438 PFR28_01439: PFR28_01439 - N-ethylmaleimide reductase, at 1,569,142 to 1,570,254 _01439
Group Condition PFR28_01435 PFR28_01436 PFR28_01437 PFR28_01438 PFR28_01439
carbon source Xanthosine (C) -3.8 +0.1 +0.2 -0.1 +0.4
carbon source 4-Acetoxy-3-methoxycinnamic (C) -2.9 +0.1 +0.2 +0.3 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -2.4 +0.0 -0.2 -0.4 +0.5
carbon source Malonic (C) 10 mM -2.7 -0.1 +0.2 +0.3 -0.2
carbon source sn-glycero-3-phosphocholine (C) -2.7 +0.2 -0.0 +0.3 -0.2
carbon source Ferulic Acid (C) 2.5 mM -1.3 -0.3 -0.4 -0.2 -0.1
carbon source Azelaic carbon 10 mM -2.4 +0.0 -0.0 -0.3 +0.5
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.2 -0.7 -0.5 -0.5 -0.6
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -1.4 -0.2 -0.2 -0.0 -0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -2.4 +0.1 +0.1 +0.2 -0.1
carbon source gluconate carbon 10 mM -2.1 -0.0 -0.0 +0.1 +0.0
carbon source Glycocyamine 10 mM (C) -1.7 -0.2 +0.1 +0.2 -0.5
carbon source Ferulic Acid (C) 2.5 mM -1.4 -0.2 -0.3 -0.3 +0.1
carbon source NAG carbon 10 mM -2.2 -0.2 -0.0 +0.2 +0.1
carbon source D-Trehalose (C) 5 mM -1.6 +0.1 -0.1 -0.3 -0.1
carbon source Vanillic Acid (C) 2.5 mM -1.4 -0.2 -0.3 -0.4 +0.2
carbon source propionate (C) 20 mM -1.8 -0.0 -0.1 -0.2 +0.2
carbon source L-Carnitine 10 mM (C) -1.8 -0.1 +0.1 +0.3 -0.3
carbon source L-Carnitine 10 mM (C) -1.7 -0.2 +0.2 +0.0 -0.1
carbon source butyrate (C) 10 mM -2.0 +0.2 +0.3 +0.3 -0.5
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -1.4 -0.2 -0.3 -0.1 +0.2
carbon source propionate carbon 20 mM -2.2 +0.0 +0.1 +0.4 -0.0
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -1.9 -0.0 +0.1 +0.3 -0.2
carbon source NAG (C) 10 mM -2.0 +0.2 +0.2 +0.0 +0.1
carbon source L-tyrosine (C) 10 mM -1.8 -0.1 +0.1 +0.1 +0.4
carbon source Glycocyamine 20 mM (C) -1.8 +0.1 +0.3 +0.3 -0.1
carbon source Glycocyamine 10 mM (C) -1.0 -0.2 +0.1 +0.5 -0.4
carbon source L-Phenylalanine carbon 5 mM -0.6 +0.1 -0.3 -0.5 +0.6
carbon source Vanillic Acid (C) 2.5 mM -0.7 -0.5 -0.3 +0.4 +0.4
carbon source propionate (C) 20 mM -1.3 +0.3 +0.1 +0.6 -0.1
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