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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_01329 and PFR28_01330 are separated by 610 nucleotides
PFR28_01330 and PFR28_01331 are separated by 255 nucleotides
PFR28_01331 and PFR28_01332 are separated by 110 nucleotides
PFR28_01332 and PFR28_01333 are separated by 248 nucleotides
PFR28_01329: PFR28_01329 - hypothetical protein, at 1,446,327 to 1,446,581
_01329
PFR28_01330: PFR28_01330 - Glucose starvation-inducible protein B, at 1,447,192 to 1,447,569
_01330
PFR28_01331: PFR28_01331 - hypothetical protein, at 1,447,825 to 1,448,706
_01331
PFR28_01332: PFR28_01332 - Zinc transporter ZupT, at 1,448,817 to 1,449,746
_01332
PFR28_01333: PFR28_01333 - hypothetical protein, at 1,449,995 to 1,450,567
_01333
Group
Condition
PFR28
_01329
PFR28
_01330
PFR28
_01331
PFR28
_01332
PFR28
_01333
carbon source
Guanosine (C)
-0.3
-4.5
+0.3
+0.1
+0.7
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct
+0.4
-2.9
-0.1
-0.0
-0.1
carbon source
2-Keto-D-gluconic hemicalcium salt (C) 10 mM
-0.4
-2.0
+0.2
-0.2
-0.1
carbon source
caffeic (C)
+0.1
-2.1
-0.1
-0.1
-0.0
carbon source
L-Carnitine (C)
-0.3
-2.3
-0.1
+0.5
+0.2
carbon source
Betaine (C)
-1.0
-1.4
-0.0
+0.3
+0.2
carbon source
octanoate (C)
-0.0
-2.3
-0.1
+0.5
+0.0
carbon source
D,L-Malic Acid (C) 10 mM
-1.1
+0.4
+0.0
-0.6
-0.5
carbon source
4-Acetoxy-3-methoxycinnamic (C)
-0.0
-1.6
-0.8
+0.6
+0.6
carbon source
Glycocyamine 20 mM (C)
+0.6
-1.5
+0.0
+0.1
-0.3
carbon source
L-Valine (C) 10 mM
+0.8
-1.2
-0.2
-0.1
-0.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-2.6
+1.2
+0.1
+0.7
-0.3
carbon source
methyl-trans-p-coumarate (C)
-0.1
-1.4
-0.6
+1.5
+0.2
carbon source
Inosine (C)
+0.2
-1.4
+0.1
+0.2
+0.6
carbon source
methyl-trans-p-coumarate (C)
-0.5
-0.5
-0.4
+1.2
-0.1
carbon source
sn-glycero-3-phosphocholine (C)
-1.0
+1.0
-0.2
+0.4
-0.3
carbon source
Glycocyamine 10 mM (C)
-0.6
+1.3
-0.1
+0.3
-0.5
carbon source
p-Coumaric (C) 2.5 mM
-0.7
+0.5
+0.0
+1.1
-0.4
carbon source
methyl-trans-p-coumarate (C)
-0.9
+0.4
-0.4
+1.3
+0.1
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.7
+0.9
+0.0
+1.0
+0.0
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.8
+0.9
-0.2
+1.5
+0.3
carbon source
p-Coumaric (C) 2.5 mM
-0.3
+0.8
+0.2
+1.0
+0.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.8
+0.9
-0.5
+0.9
-0.3
carbon source
caffeic (C) 2.5 mM
-0.2
+1.2
+0.2
+1.0
-0.3
carbon source
Vanillic Acid (C) 2.5 mM
+0.2
+1.1
+0.1
+1.3
-0.5
carbon source
methyl ferulate (C)
-0.2
+1.6
-0.2
+0.7
+0.4
carbon source
Xanthosine (C)
-0.0
+1.5
+0.1
+0.2
+0.5
carbon source
Vanillic Acid (C) 2.5 mM
-0.1
+1.3
+0.4
+0.9
-0.1
carbon source
methyl ferulate (C)
+0.3
+1.7
+0.0
+0.7
+0.1
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
+0.7
+1.4
+0.1
+1.0
+0.0
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PFR28_01331
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