Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01326 and PFR28_01327 are separated by 150 nucleotidesPFR28_01327 and PFR28_01328 are separated by 59 nucleotidesPFR28_01328 and PFR28_01329 are separated by 44 nucleotidesPFR28_01329 and PFR28_01330 are separated by 610 nucleotides PFR28_01326: PFR28_01326 - HTH-type transcriptional regulator GltC, at 1,444,388 to 1,445,293 _01326 PFR28_01327: PFR28_01327 - Protein YciE, at 1,445,444 to 1,445,953 _01327 PFR28_01328: PFR28_01328 - hypothetical protein, at 1,446,013 to 1,446,282 _01328 PFR28_01329: PFR28_01329 - hypothetical protein, at 1,446,327 to 1,446,581 _01329 PFR28_01330: PFR28_01330 - Glucose starvation-inducible protein B, at 1,447,192 to 1,447,569 _01330
Group Condition PFR28_01326 PFR28_01327 PFR28_01328 PFR28_01329 PFR28_01330
carbon source Guanosine (C) -0.8 -0.3 -0.4 -0.3 -4.5
carbon source L-Carnitine (C) -1.3 +0.3 -0.3 -0.3 -2.3
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.8 +0.1 -0.8 -0.9 -0.5
carbon source Betaine (C) -0.3 +0.1 +0.3 -1.0 -1.4
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM +0.1 +0.2 -0.3 -0.4 -2.0
carbon source L-tyrosine (C) 10 mM -1.2 +0.5 -0.3 -0.4 -0.6
carbon source L-tyrosine (C) 10 mM -0.9 +0.4 -0.1 +0.1 -1.3
carbon source L-Carnitine (C) -1.4 +0.4 -0.4 +0.4 -0.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.4 +0.4 +0.6 -2.6 +1.2
carbon source methyl-trans-p-coumarate (C) -0.6 +0.8 -0.1 -0.1 -1.4
carbon source Inosine (C) -0.9 +0.5 +0.2 +0.2 -1.4
carbon source Guanosine (C) -1.6 -0.2 -0.6 -0.2 +1.6
carbon source L-Phenylalanine 5 mM (C) -1.6 +0.1 +0.6 -0.2 +0.3
carbon source caffeic (C) +1.0 +0.6 -0.2 +0.1 -2.1
carbon source octanoate (C) +0.6 +0.6 +0.5 -0.0 -2.3
carbon source Glycocyamine 20 mM (C) +0.2 +0.5 -0.2 +0.6 -1.5
carbon source sn-glycero-3-phosphocholine (C) -0.9 +0.6 -0.0 -1.0 +1.0
carbon source Xanthosine (C) -1.9 +0.1 +0.3 +0.2 +1.2
stress D-Glucose (C); with Chloride 400 mM -0.9 +0.3 -0.3 -0.4 +1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +1.7 +0.9 +0.5 +0.4 -2.9
carbon source D,L-Malic Acid (C) -0.9 +0.4 +0.0 -0.0 +1.4
carbon source Cytidine carbon 10 mM -0.6 -0.2 +0.5 +0.4 +1.1
carbon source Betaine (C) 2.5 mM +1.9 -0.1 -0.0 +0.5 -1.0
carbon source L-Phenylalanine 5 mM (C) -0.5 +0.6 +0.3 +0.3 +1.1
carbon source Cytidine (C) +1.4 +0.4 +0.4 +0.6 -1.0
carbon source Uridine (C) 10 mM +0.7 +0.4 +0.3 -0.4 +1.1
carbon source Cytidine (C) +0.5 +0.8 +0.4 -0.4 +0.8
carbon source Glycocyamine 10 mM (C) +1.6 +0.5 +0.1 -0.6 +1.3
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.2 +0.3 +0.4 +0.7 +1.4
carbon source methyl ferulate (C) +0.8 +0.3 -0.0 +0.3 +1.7
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