Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_01289 and PFR28_01290 are separated by 8 nucleotidesPFR28_01290 and PFR28_01291 are separated by 160 nucleotidesPFR28_01291 and PFR28_01292 are separated by 78 nucleotidesPFR28_01292 and PFR28_01293 are separated by 198 nucleotides PFR28_01289: PFR28_01289 - Disulfide-bond oxidoreductase YfcG, at 1,402,104 to 1,402,802 _01289 PFR28_01290: PFR28_01290 - Trans-2,3-dihydro-3-hydroxyanthranilate isomerase, at 1,402,811 to 1,403,656 _01290 PFR28_01291: PFR28_01291 - hypothetical protein, at 1,403,817 to 1,404,899 _01291 PFR28_01292: PFR28_01292 - hypothetical protein, at 1,404,978 to 1,405,529 _01292 PFR28_01293: PFR28_01293 - hypothetical protein, at 1,405,728 to 1,406,354 _01293
Group Condition PFR28_01289 PFR28_01290 PFR28_01291 PFR28_01292 PFR28_01293
carbon source butyrate (C) 10 mM +0.0 -0.3 +0.1 N.D. -2.1
carbon source Guanosine (C) -0.8 -0.0 -0.0 N.D. -1.1
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.5 +0.0 N.D. -0.8
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.1 -1.4 -0.1 N.D. +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.5 -0.3 -0.0 N.D. -0.5
carbon source Inosine (C) -0.3 -0.4 -0.2 N.D. -0.2
carbon source D-(+)-Galactosamine (C) 10 mM -0.3 -0.4 +0.1 N.D. -0.5
carbon source Choline chloride (C) -0.4 -0.4 -0.1 N.D. +0.1
carbon source Betaine (C) 2.5 mM -0.2 +0.1 -0.0 N.D. -0.6
carbon source D,L-Malic Acid (C) -0.1 -0.6 -0.1 N.D. +0.3
carbon source Choline (C) 10 mM -0.1 -0.7 +0.1 N.D. +0.1
carbon source butyrate (C) -0.2 -0.3 -0.2 N.D. +0.3
carbon source butyrate (C) +0.0 -0.6 +0.0 N.D. +0.3
carbon source L-Lactate (C) -0.3 -0.5 +0.1 N.D. +0.3
carbon source Cytidine carbon 10 mM +0.1 -0.6 +0.2 N.D. +0.2
carbon source L-Lactate (C) 10 mM +0.1 +0.5 -0.1 N.D. -0.6
carbon source Glycerol (C) 20 mM +0.2 -0.5 +0.1 N.D. +0.2
carbon source Vanillic Acid (C) 2.5 mM +0.3 -0.2 +0.3 N.D. -0.2
carbon source Betaine (C) -0.1 -0.5 +0.4 N.D. +0.4
carbon source Guanosine (C) +0.0 -0.4 +0.3 N.D. +0.3
carbon source octanoate (C) +0.1 -0.4 +0.2 N.D. +0.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.3 +0.1 +0.1 N.D. +0.4
carbon source Glycocyamine 20 mM (C) +0.2 -0.5 +0.2 N.D. +0.5
carbon source Glycocyamine 20 mM (C) +0.4 -0.2 +0.1 N.D. +0.4
carbon source D-Glucosamine Hydrochloride carbon 10 mM -0.1 +0.4 +0.1 N.D. +0.4
carbon source methyl-trans-p-coumarate (C) +0.4 -0.2 +0.1 N.D. +0.5
carbon source D(+)-Glucuronic carbon 10 mM +0.2 +0.4 -0.1 N.D. +0.5
carbon source D-Ribose carbon 10 mM +0.1 +0.5 +0.1 N.D. +0.4
carbon source L-Phenylalanine carbon 5 mM +0.1 +0.6 -0.1 N.D. +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.3 +0.2 +0.3 N.D. +0.8
remove
PFR28_01289
plot		 remove
PFR28_01290
plot		 remove
PFR28_01291		 remove
PFR28_01292
plot		 remove
PFR28_01293
plot