Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01228 and PFR28_01229 are separated by 107 nucleotidesPFR28_01229 and PFR28_01230 are separated by 161 nucleotidesPFR28_01230 and PFR28_01231 are separated by 647 nucleotidesPFR28_01231 and PFR28_01232 are separated by 221 nucleotides PFR28_01228: PFR28_01228 - ATP-dependent Clp protease proteolytic subunit, at 1,336,595 to 1,337,236 _01228 PFR28_01229: PFR28_01229 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 1,337,344 to 1,338,627 _01229 PFR28_01230: PFR28_01230 - Lon protease, at 1,338,789 to 1,341,185 _01230 PFR28_01231: PFR28_01231 - Peptidyl-prolyl cis-trans isomerase D, at 1,341,833 to 1,343,704 _01231 PFR28_01232: PFR28_01232 - hypothetical protein, at 1,343,926 to 1,344,807 _01232
Group Condition PFR28_01228 PFR28_01229 PFR28_01230 PFR28_01231 PFR28_01232
carbon source L-Lactate (C) 10 mM N.D. N.D. -2.8 -1.3 -0.3
carbon source butyrate (C) 10 mM N.D. N.D. -1.0 -3.7 +0.5
carbon source L-Leucine (C) 10 mM N.D. N.D. -3.0 -1.0 -0.2
carbon source L-Leucine (C) 10 mM N.D. N.D. -3.8 +0.1 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. -3.3 -0.7 +0.4
carbon source D-Galacturonic Acid (C) 10 mM N.D. N.D. -1.6 -1.9 +0.1
carbon source NAG (C) 10 mM N.D. N.D. -1.4 -1.8 -0.1
carbon source L-Leucine (C) 10 mM N.D. N.D. -2.9 -0.2 -0.1
carbon source trans-aconitic (C) 5 mM N.D. N.D. -2.3 -1.0 +0.2
carbon source propionate (C) 20 mM N.D. N.D. -1.1 -2.0 -0.0
carbon source Xanthosine (C) 10 mM N.D. N.D. -1.1 -1.9 -0.1
carbon source L-Lysine (C) 10 mM N.D. N.D. -2.4 -1.1 +0.4
carbon source sn-glycero-3-phosphocholine (C) N.D. N.D. -0.7 -2.3 -0.1
carbon source L-Arginine (C) 10 mM N.D. N.D. -2.7 -0.3 +0.0
carbon source NAG carbon 10 mM N.D. N.D. -2.4 -0.5 +0.0
carbon source Xanthosine (C) 10 mM N.D. N.D. -1.3 -1.0 -0.6
carbon source Cytidine (C) N.D. N.D. -0.9 -2.0 +0.0
carbon source acetate carbon 10 mM N.D. N.D. -2.6 -0.1 -0.2
carbon source L-Arginine (C) 10 mM N.D. N.D. -1.7 -1.0 -0.1
carbon source propionate (C) 20 mM N.D. N.D. -1.2 -1.7 +0.1
carbon source Shikimic Acid carbon 10 mM N.D. N.D. -1.7 -1.0 -0.2
carbon source L-Lysine (C) 10 mM N.D. N.D. -2.4 -0.4 +0.1
carbon source L-tyrosine (C) 10 mM N.D. N.D. -1.4 -1.0 -0.3
carbon source Shikimic Acid (C) 10 mM N.D. N.D. -0.9 -1.9 +0.2
carbon source D-Glucuronic (C) 10 mM N.D. N.D. -0.7 -2.1 +0.1
carbon source D-Mannitol (C) 10 mM N.D. N.D. -0.8 -1.9 +0.3
carbon source NAG (C) 10 mM N.D. N.D. -0.7 -1.9 +0.2
carbon source acetate (C) 30 mM N.D. N.D. -1.5 -1.1 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. -1.6 -0.9 +0.3
carbon source L-Lactate (C) N.D. N.D. -1.0 -1.3 +0.3
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PFR28_01228
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