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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_01141 and PFR28_01142 are separated by 97 nucleotides
PFR28_01142 and PFR28_01143 are separated by 179 nucleotides
PFR28_01143 and PFR28_01144 are separated by 175 nucleotides
PFR28_01144 and PFR28_01145 overlap by 26 nucleotides
PFR28_01141: PFR28_01141 - hypothetical protein, at 1,262,761 to 1,263,249
_01141
PFR28_01142: PFR28_01142 - Transaldolase, at 1,263,347 to 1,264,273
_01142
PFR28_01143: PFR28_01143 - tRNA-dihydrouridine(20/20a) synthase, at 1,264,453 to 1,265,391
_01143
PFR28_01144: PFR28_01144 - hypothetical protein, at 1,265,567 to 1,266,718
_01144
PFR28_01145: PFR28_01145 - hypothetical protein, at 1,266,693 to 1,266,968
_01145
Group
Condition
PFR28
_01141
PFR28
_01142
PFR28
_01143
PFR28
_01144
PFR28
_01145
carbon source
2-Keto-D-gluconic hemicalcium salt (C) 10 mM
N.D.
-5.1
-0.1
+0.0
-0.2
carbon source
NAG carbon 10 mM
N.D.
-5.0
-0.1
-0.1
-0.0
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
N.D.
-5.6
-0.0
+0.2
+0.2
carbon source
2-Keto-D-gluconic hemicalcium salt (C) 10 mM
N.D.
-4.8
-0.1
-0.0
-0.2
carbon source
D-Mannitol (C) 10 mM
N.D.
-4.7
-0.1
-0.0
-0.3
carbon source
gluconate (C) 10 mM
N.D.
-4.6
-0.2
-0.0
-0.1
carbon source
NAG carbon 10 mM
N.D.
-5.1
-0.0
-0.0
+0.3
carbon source
D-Glucose (C) 10 mM
N.D.
-4.4
-0.1
-0.0
-0.4
carbon source
2-Keto-D-gluconic hemicalcium salt (C) 10 mM
N.D.
-4.2
+0.0
-0.1
-0.6
carbon source
D-Glucose (C) 10 mM
N.D.
-4.5
-0.1
-0.2
+0.1
carbon source
gluconate (C) 10 mM
N.D.
-4.7
+0.1
+0.1
-0.1
carbon source
NAG (C) 10 mM
N.D.
-4.5
+0.1
-0.0
-0.1
carbon source
gluconate carbon 10 mM
N.D.
-4.7
-0.0
-0.1
+0.3
carbon source
NAG carbon 10 mM
N.D.
-4.7
-0.0
-0.0
+0.3
carbon source
gluconate carbon 10 mM
N.D.
-4.5
+0.0
-0.1
+0.1
carbon source
Xanthosine (C)
N.D.
-4.5
+0.1
-0.1
+0.1
carbon source
Guanosine carbon 10 mM
N.D.
-4.8
+0.4
+0.2
+0.4
carbon source
Xanthosine (C)
N.D.
-4.9
+0.5
+0.4
+0.5
carbon source
D-Xylose (C) 10 mM
N.D.
-3.5
+1.9
+0.1
+0.0
carbon source
D-Ribose (C) 10 mM
N.D.
-3.7
+1.9
+0.4
+0.0
carbon source
D-Xylose (C) 10 mM
N.D.
-3.7
+2.2
+0.3
-0.1
carbon source
D-Xylose (C) 10 mM
N.D.
-3.5
+2.2
+0.4
-0.1
carbon source
D-Ribose (C) 10 mM
N.D.
-3.2
+1.8
+0.3
+0.5
carbon source
D-Ribose (C) 10 mM
N.D.
-3.1
+1.7
+0.3
+0.5
carbon source
Xanthosine (C) 10 mM
N.D.
-2.7
+1.8
+0.4
-0.0
carbon source
Xanthosine (C) 10 mM
N.D.
-2.8
+2.0
+0.5
+0.1
carbon source
Cytidine (C)
N.D.
-3.8
+3.4
+0.4
-0.0
carbon source
Cytidine (C)
N.D.
-3.2
+3.2
+0.4
-0.1
carbon source
Xanthosine (C) 10 mM
N.D.
-3.5
+2.5
+0.7
+0.6
carbon source
Cytidine (C)
N.D.
-3.7
+3.2
+0.5
+0.3
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PFR28_01143
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PFR28_01145
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