Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01074 and PFR28_01075 are separated by 64 nucleotidesPFR28_01075 and PFR28_01076 are separated by 175 nucleotidesPFR28_01076 and PFR28_01077 are separated by 66 nucleotidesPFR28_01077 and PFR28_01078 are separated by 125 nucleotides PFR28_01074: PFR28_01074 - Holliday junction ATP-dependent DNA helicase RuvB, at 1,186,936 to 1,189,005 _01074 PFR28_01075: PFR28_01075 - Nucleoid-associated protein YbaB, at 1,189,070 to 1,189,408 _01075 PFR28_01076: PFR28_01076 - NADPH-dependent curcumin reductase, at 1,189,584 to 1,190,618 _01076 PFR28_01077: PFR28_01077 - Recombination protein RecR, at 1,190,685 to 1,191,287 _01077 PFR28_01078: PFR28_01078 - Adenine phosphoribosyltransferase, at 1,191,413 to 1,191,961 _01078
Group Condition PFR28_01074 PFR28_01075 PFR28_01076 PFR28_01077 PFR28_01078
carbon source butyrate (C) 10 mM N.D. N.D. +0.1 -0.1 -2.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. -0.0 -0.0 -2.8
carbon source Cytidine (C) N.D. N.D. -0.0 -1.1 -1.1
carbon source Glycocyamine 20 mM (C) N.D. N.D. -0.1 -1.3 -0.5
carbon source L-Lysine (C) 10 mM N.D. N.D. +0.0 -0.7 -1.0
carbon source L-Carnitine 10 mM (C) N.D. N.D. -0.0 -0.8 -0.8
carbon source Glycocyamine 20 mM (C) N.D. N.D. +0.1 -1.4 -0.2
carbon source D(+)-Glucuronic carbon 10 mM N.D. N.D. -0.0 -0.6 -0.8
carbon source butyrate (C) 10 mM N.D. N.D. -0.0 -0.5 -0.9
carbon source Betaine (C) 2.5 mM N.D. N.D. -0.1 -0.8 -0.5
carbon source D-Ribose (C) 10 mM N.D. N.D. -0.0 -0.7 -0.6
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. -0.1 -0.7 -0.6
carbon source L-Phenylalanine 5 mM (C) N.D. N.D. +0.1 -1.1 -0.2
carbon source Glycocyamine 20 mM (C) N.D. N.D. +0.0 +0.1 -1.5
carbon source Cytidine (C) N.D. N.D. -0.1 -0.7 -0.4
stress D-Glucose (C); with Chloride 400 mM N.D. N.D. -0.1 -0.7 -0.5
carbon source L-Carnitine (C) 10 mM N.D. N.D. +0.0 -0.8 -0.4
carbon source D-Fructose (C) 10 mM N.D. N.D. +0.1 -0.4 -0.8
carbon source butyrate (C) N.D. N.D. +0.0 -0.6 -0.5
carbon source Azelaic carbon 10 mM N.D. N.D. +0.1 -0.6 -0.5
carbon source D-Glucosamine Hydrochloride (C) 10 mM N.D. N.D. -0.0 -1.3 +0.3
carbon source Trisodium citrate 10 mM (C) N.D. N.D. +0.1 -0.7 -0.3
carbon source D-Trehalose (C) 5 mM N.D. N.D. -0.0 +0.2 -1.0
carbon source methyl-trans-p-coumarate (C) N.D. N.D. -0.1 +0.3 -0.7
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. -0.0 -1.1 +0.6
carbon source Choline chloride (C) N.D. N.D. -0.0 +0.7 -0.9
carbon source 4-Acetoxy-3-methoxycinnamic (C) N.D. N.D. -0.1 +0.6 -0.8
carbon source sn-glycero-3-phosphocholine (C) N.D. N.D. -0.0 +1.0 -0.3
carbon source L-Lactate (C) N.D. N.D. -0.1 +1.3 -0.3
carbon source sn-glycero-3-phosphocholine (C) N.D. N.D. -0.0 +1.1 +0.6
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