Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_01024 and PFR28_01025 are separated by 90 nucleotidesPFR28_01025 and PFR28_01026 are separated by 191 nucleotidesPFR28_01026 and PFR28_01027 are separated by 106 nucleotidesPFR28_01027 and PFR28_01028 overlap by 25 nucleotides PFR28_01024: PFR28_01024 - Linear gramicidin synthase subunit D, at 1,109,555 to 1,122,535 _01024 PFR28_01025: PFR28_01025 - hypothetical protein, at 1,122,626 to 1,122,892 _01025 PFR28_01026: PFR28_01026 - Arylesterase, at 1,123,084 to 1,123,890 _01026 PFR28_01027: PFR28_01027 - Thiol:disulfide interchange protein DsbG, at 1,123,997 to 1,124,764 _01027 PFR28_01028: PFR28_01028 - Thiol-disulfide oxidoreductase ResA, at 1,124,740 to 1,125,609 _01028
Group Condition PFR28_01024 PFR28_01025 PFR28_01026 PFR28_01027 PFR28_01028
carbon source Guanosine (C) -0.0 -0.1 -0.4 -0.0 -1.2
carbon source D(+)-Glucuronic carbon 10 mM +0.0 -0.3 +0.0 -0.0 -1.3
carbon source Guanosine (C) +0.2 -1.0 +0.2 -0.0 -0.9
carbon source methyl-trans-p-coumarate (C) -0.0 +0.8 -0.1 -0.4 -1.8
carbon source D-Glucuronic (C) 10 mM +0.0 -0.0 -0.2 -0.3 -0.8
carbon source Guanosine carbon 10 mM +0.0 -0.3 +0.1 -0.1 -0.9
carbon source L-Carnitine 10 mM (C) +0.1 +0.4 -0.0 -0.2 -1.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM +0.0 +0.4 +0.0 -0.3 -1.0
carbon source Shikimic Acid carbon 10 mM -0.0 +0.3 +0.1 -0.0 -1.1
carbon source m-Inositol (C) 10 mM -0.0 +0.1 +0.1 -0.2 -0.9
carbon source D(+)-Glucuronic carbon 10 mM +0.0 +0.4 +0.1 -0.1 -1.2
carbon source L-Arabinose (C) 10 mM -0.0 +0.2 +0.1 -0.1 -0.9
carbon source D-(+)-Galactosamine (C) 10 mM +0.0 +0.3 -0.0 -0.4 -0.7
carbon source Cytidine (C) -0.1 +0.4 +0.1 +0.1 -1.2
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.1 +0.4 +0.2 -0.2 -1.2
carbon source D-(+)-Galactosamine (C) 10 mM -0.1 +0.3 -0.0 -0.2 -0.6
carbon source butyrate (C) 10 mM +0.0 -1.0 +0.0 -0.0 +0.3
carbon source D-(+)-Galactosamine (C) 10 mM +0.0 +0.5 +0.1 -0.2 -0.9
carbon source D(+)-Glucuronic carbon 10 mM +0.0 +0.4 +0.0 -0.1 -0.8
carbon source L-Carnitine (C) 10 mM +0.1 +0.4 +0.1 -0.0 -0.9
carbon source Guanosine carbon 10 mM +0.0 +0.4 +0.2 +0.0 -1.0
carbon source D-Glucuronic (C) 10 mM -0.0 +0.3 +0.3 -0.1 -0.8
carbon source D-(+)-Galactosamine (C) 10 mM +0.0 +0.5 -0.0 -0.1 -0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.0 +0.5 +0.1 -0.3 -0.5
carbon source Glycocyamine 20 mM (C) +0.1 -0.5 +0.1 -0.1 +0.7
carbon source D-Glucuronic (C) 10 mM -0.0 +0.8 +0.1 -0.2 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.1 +0.5 +0.1 +0.4 -0.6
carbon source D-Ribose (C) 10 mM +0.0 +0.8 +0.1 -0.1 -0.2
carbon source Vanillic Acid (C) 2.5 mM -0.1 +0.1 +0.1 +0.2 +1.0
carbon source Vanillic Acid (C) 2.5 mM +0.0 +0.5 +0.1 +0.0 +1.1
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