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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_00991 and PFR28_00992 are separated by 58 nucleotides
PFR28_00992 and PFR28_00993 are separated by 21 nucleotides
PFR28_00993 and PFR28_00994 are separated by 313 nucleotides
PFR28_00994 and PFR28_00995 are separated by 64 nucleotides
PFR28_00991: PFR28_00991 - hypothetical protein, at 1,073,886 to 1,076,828
_00991
PFR28_00992: PFR28_00992 - Virulence sensor protein BvgS, at 1,076,887 to 1,080,495
_00992
PFR28_00993: PFR28_00993 - Virulence factors putative positive transcription regulator BvgA, at 1,080,517 to 1,081,143
_00993
PFR28_00994: PFR28_00994 - Deoxyguanosinetriphosphate triphosphohydrolase, at 1,081,457 to 1,082,785
_00994
PFR28_00995: PFR28_00995 - hypothetical protein, at 1,082,850 to 1,083,185
_00995
Group
Condition
PFR28
_00991
PFR28
_00992
PFR28
_00993
PFR28
_00994
PFR28
_00995
carbon source
4-Guanidinobutyric (C)
+0.1
-0.0
-0.3
+0.1
-1.7
carbon source
methyl-trans-p-coumarate (C)
+0.1
+0.2
-1.1
-0.0
-1.0
carbon source
Cytidine (C)
-0.2
-0.1
-1.1
+0.1
-0.1
carbon source
Guanosine (C)
+0.3
+0.1
-0.5
+0.1
-1.1
carbon source
D-Trehalose (C) 5 mM
+0.1
+0.0
-0.9
+0.0
-0.3
carbon source
Glycocyamine 20 mM (C)
+0.1
+0.2
+0.1
+0.1
-1.4
carbon source
p-Coumaric (C)
+0.2
+0.1
+0.1
-0.1
-1.1
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.0
+0.2
-1.3
+0.2
+0.2
carbon source
Glycerol (C) 20 mM
+0.1
-0.2
-0.6
-0.1
+0.4
carbon source
L-Leucine (C) 10 mM
-0.0
+0.2
+0.4
+0.0
-0.9
carbon source
L-Lactate (C) 10 mM
+0.0
+0.0
+0.4
+0.1
-0.9
carbon source
methyl-trans-p-coumarate (C)
+0.2
+0.1
+0.4
-0.0
-0.8
carbon source
L-Lactate (C)
-0.1
+0.1
+0.7
+0.0
-0.9
carbon source
L-Malic (C)
+0.1
+0.0
+0.7
-0.0
-0.8
carbon source
L-Leucine (C) 10 mM
-0.0
+0.1
+0.6
+0.1
-0.7
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
+0.0
+0.2
+0.6
+0.2
-0.9
carbon source
Quinic Acid (C)
+0.0
+0.1
+0.5
+0.2
-0.7
carbon source
Adenosine (C) 10 mM
+0.2
+0.1
+0.7
-0.4
-0.4
carbon source
4-Aminobutyric carbon 10 mM
+0.2
+0.1
+0.5
+0.2
-0.8
carbon source
Quinic Acid (C) 10 mM
+0.2
+0.2
+0.7
+0.0
-0.7
carbon source
Guanosine (C)
+0.1
+0.2
+0.9
-0.2
-0.4
carbon source
Fumarate (C) 20 mM
+0.3
+0.1
+1.0
+0.0
-0.4
carbon source
Xanthosine (C)
+0.2
+0.2
+0.8
-0.2
+0.3
carbon source
Malonic (C) 10 mM
+0.2
+0.3
+0.9
+0.1
-0.2
carbon source
Malonic (C) 10 mM
+0.2
+0.3
+0.9
+0.1
-0.3
carbon source
L-Lactate (C) 10 mM
-0.1
+0.2
+0.7
+0.2
+0.5
carbon source
butyrate (C)
-0.0
+0.2
+0.2
+0.1
+1.0
carbon source
butyrate (C)
+0.0
-0.1
+1.0
+0.1
+0.4
carbon source
Guanosine (C)
+0.4
+0.1
+0.8
+0.1
+0.3
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
+0.2
+0.3
+1.2
+0.3
+0.2
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