Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_00990 and PFR28_00991 are separated by 95 nucleotidesPFR28_00991 and PFR28_00992 are separated by 58 nucleotidesPFR28_00992 and PFR28_00993 are separated by 21 nucleotidesPFR28_00993 and PFR28_00994 are separated by 313 nucleotides PFR28_00990: PFR28_00990 - Free methionine-R-sulfoxide reductase, at 1,073,308 to 1,073,790 _00990 PFR28_00991: PFR28_00991 - hypothetical protein, at 1,073,886 to 1,076,828 _00991 PFR28_00992: PFR28_00992 - Virulence sensor protein BvgS, at 1,076,887 to 1,080,495 _00992 PFR28_00993: PFR28_00993 - Virulence factors putative positive transcription regulator BvgA, at 1,080,517 to 1,081,143 _00993 PFR28_00994: PFR28_00994 - Deoxyguanosinetriphosphate triphosphohydrolase, at 1,081,457 to 1,082,785 _00994
Group Condition PFR28_00990 PFR28_00991 PFR28_00992 PFR28_00993 PFR28_00994
carbon source butyrate (C) -4.1 -0.0 +0.2 +0.2 +0.1
carbon source Inosine (C) -1.3 -0.0 +0.1 -0.7 +0.0
carbon source butyrate (C) 10 mM -1.8 +0.0 -0.0 -0.1 -0.0
carbon source Cytidine carbon 10 mM -1.9 +0.0 -0.0 +0.1 +0.2
carbon source p-Coumaric (C) -1.9 +0.2 +0.1 +0.1 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -1.1 -0.0 +0.3 -0.7 +0.1
carbon source D-Trehalose (C) 5 mM -0.7 +0.1 +0.0 -0.9 +0.0
carbon source L-Lactate (C) 10 mM -2.0 +0.0 +0.0 +0.4 +0.1
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM -1.4 -0.0 +0.2 -0.2 +0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.5 +0.0 +0.2 -1.3 +0.2
carbon source Cytidine (C) +0.3 -0.2 -0.1 -1.1 +0.1
carbon source Guanosine (C) -0.8 +0.3 +0.1 -0.5 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.6 +0.2 +0.1 -0.6 +0.2
carbon source Glycocyamine 10 mM (C) -1.2 +0.0 +0.1 +0.3 +0.1
carbon source Azelaic carbon 10 mM -1.0 -0.2 +0.0 +0.5 +0.1
carbon source L-Lactate (C) 10 mM -1.1 -0.1 +0.2 +0.7 +0.2
carbon source Choline (C) 10 mM -0.8 +0.1 +0.1 +0.5 +0.1
carbon source methyl-trans-p-coumarate (C) +0.9 +0.1 +0.2 -1.1 -0.0
carbon source Quinic Acid (C) 10 mM -0.8 +0.1 +0.1 +0.6 +0.0
carbon source D(+)-Glucuronic carbon 10 mM -0.8 +0.2 +0.1 +0.7 +0.1
carbon source butyrate (C) 10 mM +0.8 +0.2 +0.2 -0.4 -0.1
carbon source Malonic (C) 10 mM -0.2 +0.2 +0.3 +0.9 +0.1
carbon source Xanthosine (C) +0.4 +0.2 +0.2 +0.8 -0.2
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.6 +0.0 +0.2 +0.6 +0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) +1.1 +0.1 +0.3 +0.2 +0.1
carbon source L-Arginine (C) 10 mM +1.0 +0.2 +0.1 +0.4 +0.1
carbon source Fumarate (C) 20 mM +0.5 +0.3 +0.1 +1.0 +0.0
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.0 +0.2 +0.3 +1.2 +0.3
carbon source Malonic (C) 10 mM +0.7 +0.2 +0.3 +0.9 +0.1
carbon source Malonic (C) 10 mM +1.2 +0.1 +0.3 +0.8 +0.1
remove
PFR28_00990
plot
remove
PFR28_00991
plot
remove
PFR28_00992
remove
PFR28_00993
plot
remove
PFR28_00994
plot