Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_00947 and PFR28_00948 are separated by 14 nucleotidesPFR28_00948 and PFR28_00949 are separated by 231 nucleotidesPFR28_00949 and PFR28_00950 are separated by 114 nucleotidesPFR28_00950 and PFR28_00951 are separated by 234 nucleotides PFR28_00947: PFR28_00947 - Acyl-CoA thioesterase 2, at 1,031,474 to 1,032,271 _00947 PFR28_00948: PFR28_00948 - hypothetical protein, at 1,032,286 to 1,032,648 _00948 PFR28_00949: PFR28_00949 - hypothetical protein, at 1,032,880 to 1,034,361 _00949 PFR28_00950: PFR28_00950 - '3'-5' ssDNA/RNA exonuclease TatD' transl_table=11, at 1,034,476 to 1,035,285 _00950 PFR28_00951: PFR28_00951 - Membrane-bound lytic murein transglycosylase F, at 1,035,520 to 1,036,941 _00951
Group Condition PFR28_00947 PFR28_00948 PFR28_00949 PFR28_00950 PFR28_00951
carbon source butyrate (C) 10 mM +0.1 -4.9 +0.2 -0.3 -0.1
carbon source methyl ferulate (C) -1.4 -0.8 +0.0 -0.1 -0.2
carbon source methyl ferulate (C) -1.6 -0.5 -0.1 +0.1 -0.1
carbon source L-tyrosine (C) 10 mM -0.2 -1.7 -0.1 +0.1 -0.1
carbon source 4-Acetoxy-3-methoxycinnamic (C) -1.3 -0.7 +0.0 +0.1 -0.1
carbon source L-Leucine (C) 10 mM -0.1 -1.6 -0.3 +0.1 -0.2
carbon source methyl ferulate (C) -1.6 -0.5 +0.0 +0.1 -0.1
carbon source 4-Acetoxy-3-methoxycinnamic (C) -1.6 -0.5 +0.1 -0.0 +0.1
carbon source acetate carbon 10 mM +0.0 -1.6 -0.1 -0.2 +0.2
carbon source Inosine carbon 10 mM -0.2 -1.1 +0.1 -0.3 -0.1
carbon source Betaine (C) -0.1 -1.8 +0.0 +0.4 -0.1
carbon source L-Phenylalanine carbon 5 mM +0.2 -1.0 -0.2 -0.6 +0.1
carbon source Vanillic Acid (C) 2.5 mM -0.3 -0.3 -0.5 -0.7 +0.4
carbon source p-Coumaric (C) 2.5 mM -0.3 -0.5 -0.8 -0.0 +0.2
carbon source Ferulic Acid (C) 2.5 mM -0.8 -0.5 -0.5 +0.1 +0.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.0 -0.9 -0.6 -0.1 +0.4
carbon source Ferulic Acid (C) 2.5 mM -0.5 -0.5 -0.5 -0.1 +0.3
carbon source caffeic (C) 2.5 mM -0.2 -0.5 -0.6 -0.2 +0.2
carbon source sn-glycero-3-phosphocholine (C) -0.1 -1.4 +0.4 -0.1 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.9 -0.7 -0.7 -0.6 +0.3
carbon source p-Coumaric (C) -1.0 +0.2 +0.3 +0.1 -0.2
carbon source butyrate (C) 10 mM -0.5 -0.5 +0.4 -0.1 +0.3
carbon source Choline chloride (C) -0.2 -1.0 +0.3 +0.4 +0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.8 -0.6 -0.7 -0.1 +0.4
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.9 +0.8 +0.1 -0.0 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.8 +0.6 -0.9 -0.3 -0.1
carbon source Guanosine (C) -0.2 +1.0 +0.4 -0.9 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +1.2 -0.6 -0.4 +0.1 +0.2
carbon source Glycocyamine 10 mM (C) -0.3 +1.1 -0.3 +0.0 +0.0
carbon source gluconate (C) 10 mM +0.2 +1.1 -0.1 +0.4 +0.2
remove
PFR28_00947
plot
remove
PFR28_00948
plot
remove
PFR28_00949
remove
PFR28_00950
plot
remove
PFR28_00951
plot