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Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_00915 and PFR28_00916 are separated by 1496 nucleotides
PFR28_00916 and PFR28_00917 are separated by 89 nucleotides
PFR28_00917 and PFR28_00918 are separated by 79 nucleotides
PFR28_00918 and PFR28_00919 are separated by 3 nucleotides
PFR28_00915: PFR28_00915 - Chain length determinant protein, at 994,814 to 995,884
_00915
PFR28_00916: PFR28_00916 - UDP-N-acetylglucosamine 2-epimerase, at 997,381 to 998,502
_00916
PFR28_00917: PFR28_00917 - UDP-N-acetyl-D-mannosamine dehydrogenase, at 998,592 to 999,863
_00917
PFR28_00918: PFR28_00918 - UDP-N-acetylglucosamine 4,6-dehydratase (inverting), at 999,943 to 1,000,941
_00918
PFR28_00919: PFR28_00919 - UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase, at 1,000,945 to 1,002,105
_00919
Group
Condition
PFR28
_00915
PFR28
_00916
PFR28
_00917
PFR28
_00918
PFR28
_00919
carbon source
propionate (C) 20 mM
-1.5
-1.7
-1.9
-2.3
N.D.
carbon source
acetate (C) 30 mM
-1.5
-1.6
-2.2
-2.0
N.D.
carbon source
acetate (C) 30 mM
-1.3
-1.7
-2.0
-2.2
N.D.
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.5
-1.8
-1.8
-2.6
N.D.
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.8
-1.9
-1.6
-2.5
N.D.
carbon source
acetate (C) 30 mM
-1.6
-1.4
-1.9
-1.8
N.D.
carbon source
L-Hydroxyproline (C) 10 mM
-2.0
-1.4
-1.8
-1.4
N.D.
carbon source
L-Phenylalanine 5 mM (C)
-0.2
-1.2
-1.3
-3.7
N.D.
carbon source
D-(+)-Galactosamine (C) 10 mM
-0.7
-1.7
-1.7
-2.2
N.D.
carbon source
propionate (C) 20 mM
-1.0
-1.7
-1.7
-1.8
N.D.
carbon source
L-Phenylalanine 5 mM (C)
-0.2
-0.9
-1.0
-3.8
N.D.
carbon source
L-Phenylalanine 5 mM (C)
-0.2
-1.0
-1.0
-3.6
N.D.
carbon source
Xanthosine (C)
-1.5
-1.4
-0.9
-1.7
N.D.
carbon source
L-Hydroxyproline (C) 10 mM
-1.5
-1.3
-1.4
-1.3
N.D.
carbon source
L-tyrosine 5 mM (C)
-0.2
-0.8
-0.7
-3.7
N.D.
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-1.0
+2.2
+2.0
+1.3
N.D.
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.1
+2.0
+2.1
+1.4
N.D.
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
+0.0
+1.9
+1.9
+1.9
N.D.
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
+0.4
+1.9
+1.9
+2.1
N.D.
carbon source
p-Coumaric (C) 2.5 mM
+0.7
+2.5
+2.6
+1.3
N.D.
carbon source
p-Coumaric (C) 2.5 mM
+0.6
+2.9
+2.9
+1.4
N.D.
carbon source
methyl-trans-p-coumarate (C)
-0.3
+3.6
+3.7
+2.3
N.D.
carbon source
Vanillic Acid (C) 2.5 mM
+0.5
+3.2
+3.2
+3.2
N.D.
carbon source
Vanillic Acid (C) 2.5 mM
+0.2
+3.3
+3.3
+3.5
N.D.
carbon source
methyl-trans-p-coumarate (C)
-0.2
+3.7
+4.1
+2.7
N.D.
carbon source
Vanillic Acid (C) 2.5 mM
+0.6
+3.2
+3.3
+3.2
N.D.
carbon source
methyl-trans-p-coumarate (C)
+0.3
+4.5
+4.7
+2.9
N.D.
carbon source
Inosine carbon 10 mM
+0.0
+3.4
+3.5
+7.8
N.D.
carbon source
Inosine carbon 10 mM
+0.5
+3.6
+3.8
+8.2
N.D.
carbon source
Inosine carbon 10 mM
+0.9
+4.2
+4.4
+9.5
N.D.
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