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Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_00896 and PFR28_00897 are separated by 46 nucleotides
PFR28_00897 and PFR28_00898 are separated by 79 nucleotides
PFR28_00898 and PFR28_00899 are separated by 361 nucleotides
PFR28_00899 and PFR28_00900 are separated by 185 nucleotides
PFR28_00896: PFR28_00896 - hypothetical protein, at 972,563 to 975,022
_00896
PFR28_00897: PFR28_00897 - hypothetical protein, at 975,069 to 975,860
_00897
PFR28_00898: PFR28_00898 - hypothetical protein, at 975,940 to 976,866
_00898
PFR28_00899: PFR28_00899 - putative oxidoreductase YciK, at 977,228 to 977,968
_00899
PFR28_00900: PFR28_00900 - N-acetylmuramic acid 6-phosphate phosphatase, at 978,154 to 978,825
_00900
Group
Condition
PFR28
_00896
PFR28
_00897
PFR28
_00898
PFR28
_00899
PFR28
_00900
carbon source
Glycerol carbon 20 mM
-0.1
-0.0
-0.3
N.D.
-4.6
carbon source
Glycerol carbon 20 mM
-0.1
-0.1
-0.2
N.D.
-4.5
carbon source
Glycerol carbon 20 mM
-0.1
-0.1
-0.1
N.D.
-4.3
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
-1.0
-0.9
-0.9
N.D.
-0.9
carbon source
Glycerol (C) 20 mM
+0.3
+0.3
-0.1
N.D.
-4.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.1
-1.1
-1.5
N.D.
-0.8
carbon source
Glycerol (C) 20 mM
+0.4
+0.5
-0.3
N.D.
-3.9
carbon source
Vanillic Acid (C) 2.5 mM
-0.2
-1.4
-1.2
N.D.
-0.4
carbon source
Glycerol (C) 20 mM
+0.6
+0.5
-0.0
N.D.
-4.0
carbon source
p-Coumaric (C) 2.5 mM
-0.1
-1.1
-1.0
N.D.
-0.6
carbon source
Vanillic Acid (C) 2.5 mM
-0.1
-1.4
-1.0
N.D.
-0.3
carbon source
caffeic (C) 2.5 mM
-0.2
-0.7
-1.0
N.D.
-0.9
carbon source
p-Coumaric (C) 2.5 mM
-0.3
-1.1
-1.2
N.D.
-0.1
carbon source
Ferulic Acid (C) 2.5 mM
-0.3
-1.0
-1.2
N.D.
-0.1
carbon source
Vanillic Acid (C) 2.5 mM
-0.3
-1.1
-1.5
N.D.
+0.4
carbon source
p-Coumaric (C) 2.5 mM
+0.0
-0.9
-1.2
N.D.
-0.4
carbon source
Ferulic Acid (C) 2.5 mM
-0.3
-1.1
-1.0
N.D.
+0.0
carbon source
Ferulic Acid (C) 2.5 mM
-0.2
-1.0
-1.2
N.D.
-0.0
carbon source
caffeic (C) 2.5 mM
-0.1
-0.5
-0.7
N.D.
-1.1
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.2
-1.2
-1.2
N.D.
+0.2
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
-0.1
-1.1
-1.5
N.D.
+0.4
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.2
-0.6
-0.9
N.D.
-0.5
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.2
-0.7
-0.6
N.D.
-0.7
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.2
-0.7
-0.6
N.D.
-0.5
carbon source
caffeic (C) 2.5 mM
-0.1
-0.5
-0.7
N.D.
-0.6
carbon source
Xanthosine (C)
+0.1
-0.0
+0.2
N.D.
-1.5
carbon source
Xanthosine (C)
+0.3
+0.2
-0.1
N.D.
-1.4
carbon source
L-Leucine (C) 10 mM
-0.3
-0.3
-0.2
N.D.
+1.2
carbon source
butyrate (C)
+0.2
+0.0
-0.3
N.D.
+1.4
carbon source
Inosine (C)
+0.5
+0.0
-0.1
N.D.
+1.1
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