Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00752 and PFR28_00753 are separated by 13 nucleotidesPFR28_00753 and PFR28_00754 are separated by 155 nucleotidesPFR28_00754 and PFR28_00755 are separated by 107 nucleotidesPFR28_00755 and PFR28_00756 are separated by 193 nucleotides PFR28_00752: PFR28_00752 - Biotin transporter, at 796,415 to 797,281 _00752 PFR28_00753: PFR28_00753 - HTH-type transcriptional regulator DmlR, at 797,295 to 798,203 _00753 PFR28_00754: PFR28_00754 - putative hydrolase YcaC, at 798,359 to 799,003 _00754 PFR28_00755: PFR28_00755 - Miniconductance mechanosensitive channel YbdG, at 799,111 to 800,409 _00755 PFR28_00756: PFR28_00756 - ATP-dependent RNA helicase RhlE, at 800,603 to 801,949 _00756
Group Condition PFR28_00752 PFR28_00753 PFR28_00754 PFR28_00755 PFR28_00756
carbon source butyrate (C) +0.2 -0.1 -0.1 +0.1 -3.5
carbon source sn-glycero-3-phosphocholine (C) +0.4 +0.1 +0.2 +0.1 -3.2
carbon source NAG carbon 10 mM +0.1 -0.0 -0.0 +0.1 -2.5
stress D-Glucose (C); with Chloride 200 mM +0.0 -0.4 +0.0 -0.0 -1.8
carbon source D-Trehalose (C) 5 mM -0.1 -0.0 +0.0 -0.1 -1.8
carbon source L-Lactate (C) 10 mM +0.1 -0.2 +0.3 +0.1 -2.2
carbon source methyl-trans-p-coumarate (C) +0.1 +0.2 +0.0 -0.0 -2.1
carbon source Betaine (C) +0.1 -0.7 -0.2 +0.2 -1.1
carbon source NAG (C) 10 mM -0.2 +0.3 -0.0 -0.1 -1.7
carbon source Glycerol carbon 20 mM -0.1 +0.0 +0.0 +0.0 -1.6
carbon source L-tyrosine (C) 10 mM -0.1 +0.2 +0.1 -0.2 -1.7
carbon source NAG carbon 10 mM -0.1 -0.2 -0.2 +0.0 -1.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.4 -0.1 +0.3 -0.0 -2.0
carbon source Glycocyamine 20 mM (C) +0.2 -0.3 +0.3 +0.1 -1.8
carbon source Inosine (C) +0.2 -0.1 +0.3 +0.2 -1.9
carbon source D-Glucuronic (C) 10 mM +0.1 +0.3 -0.2 +0.1 -1.5
carbon source Guanosine (C) +0.4 -1.3 +0.1 +0.4 -0.6
carbon source sn-glycero-3-phosphocholine (C) +0.1 +0.1 +0.2 +0.1 -1.2
carbon source Choline chloride (C) +0.2 -0.0 +0.2 -0.1 -1.1
carbon source D-Trehalose (C) 5 mM -0.1 -0.8 -0.2 -0.2 +0.7
carbon source Guanosine (C) +0.5 +0.6 +0.2 +0.1 -1.3
stress D-Glucose (C); with Chloride 400 mM +0.4 +0.3 -0.1 +0.1 -0.6
carbon source L-Lactate (C) +0.3 +0.4 +0.3 +0.1 -0.5
carbon source Adenosine (C) 10 mM +0.1 -0.2 -0.0 -0.2 +1.1
carbon source butyrate (C) 10 mM -0.3 +0.2 +0.0 -0.1 +1.0
carbon source trans-aconitic (C) +0.3 +0.2 +0.1 +0.0 +0.9
carbon source D-Galactose (C) 10 mM +0.3 +0.3 +0.1 +0.0 +0.9
carbon source butyrate (C) +0.2 +0.1 +0.1 -0.0 +1.2
carbon source p-Coumaric (C) +0.4 +0.1 +0.2 -0.1 +1.1
carbon source p-Coumaric (C) +0.3 +0.2 +0.3 -0.0 +1.1
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