Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00745 and PFR28_00746 are separated by 81 nucleotidesPFR28_00746 and PFR28_00747 are separated by 4 nucleotidesPFR28_00747 and PFR28_00748 are separated by 14 nucleotidesPFR28_00748 and PFR28_00749 are separated by 50 nucleotides PFR28_00745: PFR28_00745 - Putative multidrug export ATP-binding/permease protein, at 788,817 to 790,649 _00745 PFR28_00746: PFR28_00746 - Peptidyl-prolyl cis-trans isomerase A, at 790,731 to 791,297 _00746 PFR28_00747: PFR28_00747 - (E)-2-((N-methylformamido)methylene)succinate hydrolase, at 791,302 to 792,105 _00747 PFR28_00748: PFR28_00748 - HTH-type transcriptional regulator YhaJ, at 792,120 to 793,043 _00748 PFR28_00749: PFR28_00749 - hypothetical protein, at 793,094 to 793,408 _00749
Group Condition PFR28_00745 PFR28_00746 PFR28_00747 PFR28_00748 PFR28_00749
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.3 +0.1 -0.3 -1.7 -1.3
carbon source methyl-trans-p-coumarate (C) -0.1 -0.1 -0.2 -0.2 -1.8
carbon source methyl-trans-p-coumarate (C) -0.2 -0.1 -0.2 -0.1 -1.4
carbon source methyl ferulate (C) +0.1 +0.1 -0.5 -0.4 -1.3
carbon source methyl-trans-p-coumarate (C) -0.1 +0.0 -0.2 -0.3 -1.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.4 -0.3 -0.5 -0.1 -0.9
carbon source methyl ferulate (C) -0.0 +0.0 -0.2 -0.5 -0.7
carbon source D-(+)-Galactosamine (C) 10 mM +0.1 -0.4 -0.0 -0.2 -0.6
carbon source Guanosine (C) +0.1 +0.1 -0.3 -0.5 -0.3
carbon source Vanillic Acid (C) 2.5 mM -0.1 +0.3 -0.2 +0.1 -0.8
carbon source propionate carbon 20 mM -0.1 +0.4 -0.0 -0.1 -0.7
carbon source octanoate (C) -0.1 +0.0 -0.2 +0.4 -0.7
carbon source propionate carbon 20 mM -0.1 +0.3 +0.1 -0.2 -0.5
carbon source sn-glycero-3-phosphocholine (C) -0.0 +0.5 -0.3 -0.3 -0.1
carbon source Xanthosine (C) +0.2 +0.4 -0.2 -0.5 -0.2
carbon source butyrate (C) 10 mM +0.2 -0.4 +0.5 -0.4 -0.0
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 -0.4 +0.2 +0.8 -0.8
carbon source NAG (C) 10 mM +0.1 -0.1 -0.2 -0.3 +0.9
carbon source L-Lactate (C) 10 mM -0.0 -0.3 +0.3 -0.0 +0.6
carbon source butyrate (C) +0.1 +0.7 +0.2 -0.2 -0.3
carbon source NAG (C) 10 mM +0.1 +0.2 -0.2 -0.3 +0.9
carbon source NAG carbon 10 mM -0.0 +0.2 +0.1 -0.2 +0.7
carbon source L-Leucine (C) 10 mM +0.0 -0.2 +0.1 +0.2 +0.8
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 -0.2 +0.1 +0.7 +0.3
carbon source D-Glucosamine Hydrochloride carbon 10 mM +0.0 +0.5 +0.0 -0.1 +0.6
carbon source NAG (C) 10 mM +0.2 +0.2 -0.0 -0.2 +1.0
carbon source D-Glucosamine Hydrochloride (C) 10 mM +0.1 +0.6 +0.1 -0.3 +0.6
carbon source L-Leucine (C) 10 mM +0.1 -0.1 +0.1 +0.2 +0.9
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.3 +0.1 +0.4 +0.7 -0.1
carbon source L-Leucine (C) 10 mM +0.1 +0.2 +0.1 +0.2 +1.0
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