Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00737 and PFR28_00738 are separated by 131 nucleotidesPFR28_00738 and PFR28_00739 are separated by 147 nucleotidesPFR28_00739 and PFR28_00740 are separated by 338 nucleotidesPFR28_00740 and PFR28_00741 are separated by 90 nucleotides PFR28_00737: PFR28_00737 - hypothetical protein, at 776,458 to 777,369 _00737 PFR28_00738: PFR28_00738 - Isocitrate dehydrogenase kinase/phosphatase, at 777,501 to 779,222 _00738 PFR28_00739: PFR28_00739 - hypothetical protein, at 779,370 to 783,365 _00739 PFR28_00740: PFR28_00740 - Beta-ketodecanoyl-[acyl-carrier-protein] synthase, at 783,704 to 784,825 _00740 PFR28_00741: PFR28_00741 - ECF RNA polymerase sigma-E factor, at 784,916 to 785,527 _00741
Group Condition PFR28_00737 PFR28_00738 PFR28_00739 PFR28_00740 PFR28_00741
carbon source L-Leucine (C) 10 mM -0.5 -4.0 -0.1 -0.1 +0.2
carbon source 5-Aminovaleric carbon 10 mM +0.1 -4.4 -0.0 +0.2 +0.0
carbon source L-Leucine (C) 10 mM -0.4 -4.1 +0.1 +0.3 +0.0
carbon source L-Lysine (C) 10 mM -0.3 -3.6 +0.1 -0.2 -0.0
carbon source L-Lysine (C) 10 mM -0.3 -3.9 -0.2 +0.3 +0.2
carbon source L-Lysine (C) 10 mM -0.2 -3.3 -0.0 +0.1 -0.2
carbon source L-Leucine (C) 10 mM -0.4 -3.6 +0.1 -0.0 +0.2
carbon source 5-Aminovaleric carbon 10 mM +0.2 -4.0 +0.1 +0.1 +0.1
carbon source 5-Aminovaleric carbon 10 mM +0.1 -3.4 -0.0 +0.3 -0.0
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.9 -0.2 -0.3 -0.5 -0.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -2.3 -0.2 -0.4 +0.1 +0.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -2.1 -0.2 -0.3 -0.2 +0.0
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -2.0 -0.2 -0.5 -0.0 +0.1
carbon source L-Lysine (C) 10 mM -0.2 -2.0 -0.4 -0.1 +0.1
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.8 -0.1 -0.2 -0.1 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.2 -1.0 -0.9 -0.1 -0.1
carbon source methyl-trans-p-coumarate (C) -0.2 +0.2 -0.2 -1.6 -0.3
carbon source methyl-trans-p-coumarate (C) +0.4 +0.0 -0.1 -2.0 -0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.6 +0.1 -0.1 -0.7 -0.6
carbon source methyl-trans-p-coumarate (C) +0.1 +0.0 +0.1 -1.8 -0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -1.4 -0.0 -0.2 -0.0 -0.0
carbon source L-tyrosine 5 mM (C) -0.8 -0.1 -0.2 -0.2 -0.2
carbon source butyrate (C) 10 mM -0.0 -0.1 -0.0 -1.7 +0.3
carbon source Inosine carbon 10 mM +0.2 +0.1 -0.6 -0.7 -0.2
carbon source octanoate (C) -0.0 -0.7 -0.3 +0.3 +0.2
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.2 +0.1 +0.3 -1.1 +0.1
carbon source 4-Guanidinobutyric (C) +0.2 -0.1 +0.2 -0.9 +0.4
carbon source methyl ferulate (C) +0.3 +0.1 +0.3 -0.7 +0.1
carbon source p-Coumaric (C) +0.3 +0.4 +0.1 -0.7 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 +0.2 +0.3 -0.5 +0.3
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