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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_00726 and PFR28_00727 are separated by 336 nucleotides
PFR28_00727 and PFR28_00728 are separated by 54 nucleotides
PFR28_00728 and PFR28_00729 overlap by 4 nucleotides
PFR28_00729 and PFR28_00730 overlap by 4 nucleotides
PFR28_00726: PFR28_00726 - hypothetical protein, at 764,839 to 765,381
_00726
PFR28_00727: PFR28_00727 - Putative metabolite transport protein YjhB, at 765,718 to 767,004
_00727
PFR28_00728: PFR28_00728 - 5-oxoprolinase subunit A 3, at 767,059 to 767,811
_00728
PFR28_00729: PFR28_00729 - 5-oxoprolinase subunit B, at 767,808 to 768,512
_00729
PFR28_00730: PFR28_00730 - 5-oxoprolinase subunit C, at 768,509 to 769,429
_00730
Group
Condition
PFR28
_00726
PFR28
_00727
PFR28
_00728
PFR28
_00729
PFR28
_00730
carbon source
L-pyroglutamic carbon 10 mM
-0.1
-3.3
-4.2
-4.3
-3.7
carbon source
L-pyroglutamic (C) 10 mM
-0.0
-2.9
-3.9
-3.5
-4.1
carbon source
L-pyroglutamic carbon 10 mM
-0.0
-2.2
-3.1
-2.9
-4.0
carbon source
L-pyroglutamic (C) 10 mM
-0.0
-2.7
-3.6
-3.2
-2.6
carbon source
L-pyroglutamic (C) 10 mM
-0.4
-2.0
-3.6
-3.0
-2.5
carbon source
L-pyroglutamic carbon 10 mM
+0.2
-2.3
-3.3
-2.9
-2.7
carbon source
Shikimic Acid carbon 10 mM
+0.1
+0.0
-2.7
-2.7
-3.8
carbon source
D(+)-Glucuronic carbon 10 mM
+0.4
+0.0
-1.8
-2.3
-4.3
carbon source
D(+)-Glucuronic carbon 10 mM
+0.2
+0.1
-1.8
-2.2
-3.6
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
+0.4
-0.0
-2.6
-3.0
-1.9
carbon source
D(+)-Glucuronic carbon 10 mM
-0.2
-0.1
-1.8
-2.6
-2.3
carbon source
caffeic (C) 2.5 mM
+0.3
-0.1
-2.4
-2.7
-2.0
carbon source
caffeic (C) 2.5 mM
+0.5
-0.0
-2.1
-2.4
-2.5
carbon source
Shikimic Acid carbon 10 mM
-0.0
+0.0
-1.9
-2.0
-2.5
carbon source
D-Ribose (C) 10 mM
+0.2
+0.1
-2.1
-2.1
-2.3
carbon source
L-Arginine (C) 10 mM
-0.0
-0.1
-1.4
-1.5
-2.9
carbon source
L-Arginine (C) 10 mM
-0.2
-0.0
-1.7
-1.6
-2.4
carbon source
Shikimic Acid carbon 10 mM
+0.1
+0.0
-2.5
-2.0
-1.4
carbon source
methyl ferulate (C)
+0.4
+0.0
-1.1
-1.3
-3.7
carbon source
Shikimic Acid (C) 10 mM
-0.1
-0.1
-0.9
-1.6
-2.9
carbon source
p-Coumaric (C) 2.5 mM
+0.5
-0.1
-2.0
-1.9
-2.2
carbon source
caffeic (C) 2.5 mM
+0.3
+0.1
-2.2
-2.0
-1.7
carbon source
Cytidine (C)
+0.3
-0.1
-1.1
-1.6
-2.8
carbon source
D-Ribose (C) 10 mM
+0.2
-0.0
-1.6
-1.2
-2.6
carbon source
p-Coumaric (C) 2.5 mM
+0.4
-0.1
-2.1
-1.6
-1.8
carbon source
Cytidine (C)
+0.4
-0.0
-1.4
-1.2
-2.6
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
+0.4
+0.0
-1.7
-1.3
-2.2
carbon source
4-Acetoxy-3-methoxycinnamic (C)
+0.5
-0.0
-0.8
-1.4
-2.9
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
+0.6
+0.1
-1.7
-1.5
-1.6
carbon source
methyl-trans-p-coumarate (C)
+1.3
-0.0
-1.1
-1.5
-1.8
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