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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
PFR28_00716 and PFR28_00717 are separated by 32 nucleotides
PFR28_00717 and PFR28_00718 are separated by 127 nucleotides
PFR28_00718 and PFR28_00719 are separated by 77 nucleotides
PFR28_00719 and PFR28_00720 are separated by 214 nucleotides
PFR28_00716: PFR28_00716 - hypothetical protein, at 756,652 to 757,101
_00716
PFR28_00717: PFR28_00717 - hypothetical protein, at 757,134 to 758,363
_00717
PFR28_00718: PFR28_00718 - hypothetical protein, at 758,491 to 758,868
_00718
PFR28_00719: PFR28_00719 - hypothetical protein, at 758,946 to 759,416
_00719
PFR28_00720: PFR28_00720 - hypothetical protein, at 759,631 to 760,005
_00720
Group
Condition
PFR28
_00716
PFR28
_00717
PFR28
_00718
PFR28
_00719
PFR28
_00720
carbon source
Vanillic Acid (C) 2.5 mM
+1.0
-0.2
-1.6
-0.2
-1.2
carbon source
methyl ferulate (C)
-0.8
-0.4
-0.7
-0.1
-0.0
carbon source
Inosine carbon 10 mM
-0.0
-0.2
-1.1
+0.1
-0.5
carbon source
Guanosine (C)
-0.7
-0.5
+0.0
-0.2
-0.3
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
+0.3
+0.1
-0.6
-0.2
-0.9
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
-0.0
+0.1
-0.1
-0.2
-1.1
carbon source
4-Hydroxybenzoic Acid (C) 2.5 mM
+0.1
-0.1
+0.1
+0.1
-1.3
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
+0.5
-0.2
-0.6
+0.1
-0.7
carbon source
D(+)-Glucuronic carbon 10 mM
-0.4
-0.5
+0.4
-0.1
-0.4
carbon source
Ferulic Acid (C) 2.5 mM
+0.1
+0.2
-0.3
-0.0
-0.9
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.5
+0.1
-0.2
+0.1
-1.4
carbon source
caffeic (C) 2.5 mM
+0.2
+0.2
-0.1
-0.2
-1.1
carbon source
butyrate (C) 10 mM
+0.3
+0.3
-0.8
-0.5
-0.1
carbon source
L-Lysine (C) 10 mM
-0.3
-0.6
+0.4
+0.1
-0.4
carbon source
caffeic (C) 2.5 mM
+0.4
+0.0
-0.1
-0.1
-1.0
carbon source
p-Coumaric (C) 2.5 mM
+0.3
+0.1
-0.2
-0.1
-0.8
carbon source
L-Lactate (C)
-0.3
-0.4
-0.5
-0.1
+0.5
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct
-0.1
+0.3
-1.0
-0.2
+0.4
carbon source
Ferulic Acid (C) 2.5 mM
+0.4
+0.2
-0.1
-0.1
-0.8
carbon source
L-Hydroxyproline (C) 10 mM
-0.3
-0.2
-0.4
-0.2
+0.5
carbon source
Vanillic Acid (C) 2.5 mM
+0.2
-0.3
+0.4
-0.2
-0.6
carbon source
Vanillic Acid (C) 2.5 mM
+0.7
-0.3
+0.1
+0.1
-1.0
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.6
-0.3
+0.5
-0.5
-0.6
carbon source
Inosine (C)
-0.8
-0.2
+0.6
+0.1
+0.1
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.7
-0.4
+0.0
-0.2
-0.5
carbon source
Ferulic Acid (C) 2.5 mM
+0.6
+0.3
-0.2
-0.0
-0.8
carbon source
L-Carnitine (C) 10 mM
-0.5
-0.3
+0.5
+0.1
+0.2
carbon source
p-Coumaric (C) 2.5 mM
+0.7
+0.2
+0.1
-0.1
-0.8
carbon source
D,L-Malic Acid (C) 10 mM
-0.0
-0.3
+0.7
-0.2
+0.5
carbon source
Guanosine (C)
-0.1
-0.4
+0.8
+0.1
+0.3
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PFR28_00717
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PFR28_00718
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PFR28_00719
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PFR28_00720
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