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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. RS175
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500 nt
PFR28_00714 and PFR28_00715 are separated by 50 nucleotides
PFR28_00715 and PFR28_00716 are separated by 159 nucleotides
PFR28_00716 and PFR28_00717 are separated by 32 nucleotides
PFR28_00717 and PFR28_00718 are separated by 127 nucleotides
PFR28_00714: PFR28_00714 - Glyoxylate/hydroxypyruvate reductase A, at 754,916 to 755,848
_00714
PFR28_00715: PFR28_00715 - malonic semialdehyde reductase RutE, at 755,899 to 756,492
_00715
PFR28_00716: PFR28_00716 - hypothetical protein, at 756,652 to 757,101
_00716
PFR28_00717: PFR28_00717 - hypothetical protein, at 757,134 to 758,363
_00717
PFR28_00718: PFR28_00718 - hypothetical protein, at 758,491 to 758,868
_00718
Group
Condition
PFR28
_00714
PFR28
_00715
PFR28
_00716
PFR28
_00717
PFR28
_00718
carbon source
methyl ferulate (C)
-0.0
-0.2
-0.8
-0.4
-0.7
carbon source
L-Lactate (C) 10 mM
+0.3
-1.7
+0.3
-0.5
-0.3
carbon source
butyrate (C) 10 mM
+0.1
-1.4
+0.3
+0.3
-0.8
carbon source
sn-glycero-3-phosphocholine (C)
-0.1
-0.9
-0.3
-0.2
-0.1
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct
-0.2
-0.3
-0.1
+0.3
-1.0
carbon source
Cytidine (C)
+0.1
-1.1
+0.2
+0.0
-0.4
carbon source
Inosine carbon 10 mM
+0.0
+0.5
-0.0
-0.2
-1.1
carbon source
Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM
-0.0
-0.3
+0.5
-0.2
-0.6
carbon source
Inosine (C)
+0.0
-0.3
-0.8
-0.2
+0.6
carbon source
Xanthosine (C)
-0.0
-0.9
+0.2
-0.2
+0.3
carbon source
Vanillic Acid (C) 2.5 mM
+0.1
+0.1
+1.0
-0.2
-1.6
carbon source
D-Glucuronic (C) 10 mM
+0.0
-0.1
-1.0
-0.0
+0.5
stress
D-Glucose (C); with Chloride 400 mM
-0.2
+0.7
-0.1
-0.2
-0.7
carbon source
L-Lactate (C)
-0.0
+0.7
-0.3
-0.4
-0.5
carbon source
L-Phenylalanine carbon 5 mM
-0.1
+0.1
-0.6
-0.3
+0.5
stress
D-Glucose (C); with Chloride 400 mM
-0.2
+0.6
-0.3
-0.3
-0.2
carbon source
L-Lysine (C) 10 mM
+0.0
+0.3
-0.4
-0.5
+0.4
carbon source
Betaine (C)
+0.3
+0.5
-0.4
+0.0
-0.5
carbon source
Vanillic Acid (C) 2.5 mM
+0.1
-0.7
+0.7
-0.3
+0.1
carbon source
methyl-trans-p-coumarate (C)
-0.3
+0.6
-0.4
-0.1
+0.2
carbon source
Guanosine (C)
-0.0
-0.3
-0.1
-0.4
+0.8
carbon source
D(+)-Glucuronic carbon 10 mM
+0.2
+0.3
-0.4
-0.5
+0.4
carbon source
Cytidine (C)
+0.0
+0.8
-0.1
-0.4
-0.2
carbon source
L-Lactate (C) 10 mM
+0.2
+0.5
+0.3
-0.2
-0.5
carbon source
4-Hydroxyphenylpropionic (C) 2.5 mM
+0.4
-0.5
+0.6
-0.3
+0.5
carbon source
Uridine (C) 10 mM
+0.1
+0.6
+0.1
-0.5
+0.6
carbon source
trans-aconitic (C) 5 mM
+0.1
+0.4
+0.2
-0.4
+0.5
carbon source
Shikimic Acid carbon 10 mM
+0.2
+0.6
-0.1
-0.2
+0.4
carbon source
Choline chloride (C)
+0.0
+1.0
-0.5
-0.1
+0.4
carbon source
sn-glycero-3-phosphocholine (C)
-0.0
+0.3
+0.4
-0.3
+0.6
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