Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00709 and PFR28_00710 are separated by 3 nucleotidesPFR28_00710 and PFR28_00711 are separated by 158 nucleotidesPFR28_00711 and PFR28_00712 are separated by 216 nucleotidesPFR28_00712 and PFR28_00713 overlap by 4 nucleotides PFR28_00709: PFR28_00709 - hypothetical protein, at 749,861 to 750,226 _00709 PFR28_00710: PFR28_00710 - HTH-type transcriptional regulator YidZ, at 750,230 to 751,345 _00710 PFR28_00711: PFR28_00711 - Phosphoethanolamine transferase EptA, at 751,504 to 753,153 _00711 PFR28_00712: PFR28_00712 - Ribonuclease D, at 753,370 to 754,503 _00712 PFR28_00713: PFR28_00713 - Protein YcgL, at 754,500 to 754,793 _00713
Group Condition PFR28_00709 PFR28_00710 PFR28_00711 PFR28_00712 PFR28_00713
carbon source sn-glycero-3-phosphocholine (C) -2.0 +0.0 +0.1 -0.0 -0.5
carbon source methyl-trans-p-coumarate (C) -0.9 +0.0 -0.1 -0.7 -0.5
carbon source methyl ferulate (C) -1.1 -0.1 +0.1 -0.3 -0.5
carbon source methyl-trans-p-coumarate (C) -1.0 -0.1 +0.1 -0.7 -0.2
carbon source Guanosine (C) -0.9 +0.0 +0.1 -0.6 -0.5
carbon source NAG (C) 10 mM -0.9 -0.1 -0.0 -0.4 -0.3
carbon source methyl ferulate (C) -0.6 -0.3 +0.1 -0.5 -0.3
carbon source NAG (C) 10 mM -0.8 -0.1 +0.1 -0.4 -0.5
carbon source Guanosine (C) -1.2 +0.1 +0.1 -0.2 -0.4
carbon source octanoate (C) -1.2 -0.0 +0.1 -0.1 -0.4
carbon source Choline chloride (C) -1.0 -0.0 -0.1 -0.2 -0.2
carbon source Choline chloride (C) -1.1 +0.1 +0.0 +0.0 -0.4
carbon source caffeic (C) -0.7 -0.0 +0.1 -0.3 -0.4
carbon source D,L-Malic Acid (C) -1.2 +0.0 +0.2 +0.1 -0.2
carbon source sn-glycero-3-phosphocholine (C) -1.0 +0.3 +0.2 -0.4 -0.2
carbon source 4-Aminobutyric (C) 10 mM -1.0 +0.0 +0.2 -0.3 -0.0
carbon source methyl-trans-p-coumarate (C) -0.2 +0.2 +0.1 -0.7 -0.4
carbon source sn-glycero-3-phosphocholine (C) -0.5 +0.2 +0.2 -0.4 -0.4
carbon source L-Valine (C) 10 mM -0.9 +0.0 -0.1 +0.3 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -1.0 +0.6 +0.1 +0.1 -0.5
carbon source Cytidine carbon 10 mM -0.7 +0.1 -0.0 +0.5 -0.3
carbon source D-Ribose carbon 10 mM -0.5 -0.2 +0.2 +0.4 -0.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.4 +0.3 -0.1 -0.3 -0.5
carbon source Cytidine carbon 10 mM -0.6 +0.0 -0.1 +0.6 -0.1
carbon source Cytidine (C) -0.4 +0.0 -0.1 +0.7 -0.4
carbon source Shikimic Acid carbon 10 mM +0.5 +0.1 -0.6 +0.2 -0.2
carbon source D-(+)-Galactosamine (C) 10 mM +0.8 +0.1 +0.1 -0.4 -0.2
carbon source Betaine (C) 2.5 mM +0.9 +0.2 +0.1 -0.3 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +1.0 +0.2 -0.1 -0.1 -0.1
carbon source Cytidine (C) +0.5 +0.4 +0.2 +0.6 -0.2
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