Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00617 and PFR28_00618 are separated by 593 nucleotidesPFR28_00618 and PFR28_00619 are separated by 247 nucleotidesPFR28_00619 and PFR28_00620 are separated by 216 nucleotidesPFR28_00620 and PFR28_00621 overlap by 4 nucleotides PFR28_00617: PFR28_00617 - hypothetical protein, at 657,849 to 658,046 _00617 PFR28_00618: PFR28_00618 - Pca regulon regulatory protein, at 658,640 to 659,482 _00618 PFR28_00619: PFR28_00619 - 4-hydroxybenzoate transporter PcaK, at 659,730 to 661,076 _00619 PFR28_00620: PFR28_00620 - 3-oxoadipate CoA-transferase subunit A, at 661,293 to 662,153 _00620 PFR28_00621: PFR28_00621 - 3-oxoadipate CoA-transferase subunit B, at 662,150 to 662,929 _00621
Group Condition PFR28_00617 PFR28_00618 PFR28_00619 PFR28_00620 PFR28_00621
carbon source Shikimic Acid carbon 10 mM +0.5 -5.6 -5.2 -5.2 -5.7
carbon source Shikimic Acid carbon 10 mM +0.8 -4.9 -5.0 -4.4 -5.6
carbon source Shikimic Acid carbon 10 mM +0.6 -4.7 -4.7 -4.9 -5.1
carbon source Shikimic Acid (C) 10 mM -0.0 -4.5 -2.3 -4.4 -5.6
carbon source Quinic Acid (C) 10 mM +0.1 -5.6 -0.9 -5.2 -4.8
carbon source Quinic Acid (C) 10 mM +0.1 -5.2 -0.7 -4.5 -5.5
carbon source Shikimic Acid (C) 10 mM +0.1 -4.3 -2.5 -3.6 -5.0
carbon source Shikimic Acid (C) 10 mM +0.3 -4.3 -2.0 -3.4 -3.9
carbon source p-Coumaric (C) -0.5 -3.1 -0.5 -4.4 -3.6
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.1 -4.2 +0.1 -4.1 -4.0
carbon source 4-Acetoxy-3-methoxycinnamic (C) +0.1 -4.3 -0.0 -4.8 -3.1
carbon source caffeic (C) -0.3 -4.5 -0.2 -3.2 -3.8
carbon source p-Coumaric (C) -0.6 -3.1 -0.6 -2.6 -4.7
carbon source caffeic (C) 2.5 mM -1.0 -3.3 -0.1 -2.9 -4.0
carbon source caffeic (C) -0.5 -3.6 +0.1 -3.6 -3.5
carbon source p-Coumaric (C) -0.1 -2.8 -0.6 -3.4 -3.8
carbon source caffeic (C) -0.4 -3.4 -0.1 -3.2 -3.4
carbon source caffeic (C) 2.5 mM -0.7 -3.3 -0.0 -3.2 -3.1
carbon source p-Coumaric (C) 2.5 mM -0.8 -2.9 -0.4 -3.0 -3.1
carbon source Ferulic Acid (C) 2.5 mM -0.7 -3.0 -0.2 -3.2 -3.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -1.1 -3.0 +0.0 -2.6 -3.0
carbon source caffeic (C) 2.5 mM -0.8 -2.9 +0.1 -2.9 -3.0
carbon source methyl ferulate (C) -0.6 -2.9 -0.1 -3.3 -2.6
carbon source Ferulic Acid (C) 2.5 mM -0.5 -2.3 -0.3 -2.6 -3.3
carbon source Vanillic Acid (C) 2.5 mM -0.8 -1.8 -0.6 -2.4 -3.0
carbon source p-Coumaric (C) 2.5 mM -0.9 -2.2 -0.9 -2.2 -2.4
carbon source Ferulic Acid (C) 2.5 mM -0.9 -2.2 -0.2 -2.9 -2.4
carbon source Vanillic Acid (C) 2.5 mM -0.8 -1.6 -0.9 -2.6 -2.1
carbon source p-Coumaric (C) 2.5 mM -0.7 -1.9 -0.3 -2.5 -2.7
carbon source Quinic Acid (C) -0.5 -2.4 -0.7 -2.1 -2.0
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