Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00574 and PFR28_00575 are separated by 17 nucleotidesPFR28_00575 and PFR28_00576 are separated by 146 nucleotidesPFR28_00576 and PFR28_00577 are separated by 11 nucleotidesPFR28_00577 and PFR28_00578 are separated by 137 nucleotides PFR28_00574: PFR28_00574 - 6-phosphogluconolactonase, at 616,140 to 616,853 _00574 PFR28_00575: PFR28_00575 - 2-dehydro-3-deoxy-phosphogluconate aldolase, at 616,871 to 617,536 _00575 PFR28_00576: PFR28_00576 - Isopenicillin N epimerase, at 617,683 to 618,870 _00576 PFR28_00577: PFR28_00577 - hypothetical protein, at 618,882 to 619,187 _00577 PFR28_00578: PFR28_00578 - hypothetical protein, at 619,325 to 619,789 _00578
Group Condition PFR28_00574 PFR28_00575 PFR28_00576 PFR28_00577 PFR28_00578
carbon source butyrate (C) 10 mM N.D. N.D. +0.3 -0.2 -1.4
carbon source propionate carbon 20 mM N.D. N.D. -0.1 -0.6 -0.6
carbon source L-Lysine (C) 10 mM N.D. N.D. +0.0 -0.6 -0.4
carbon source Azelaic carbon 10 mM N.D. N.D. -0.1 -0.4 -0.4
carbon source Cytidine carbon 10 mM N.D. N.D. -0.1 -0.4 -0.3
carbon source Glycocyamine 20 mM (C) N.D. N.D. +0.4 -0.5 -0.6
carbon source L-Lactate (C) 10 mM N.D. N.D. +0.2 -1.0 +0.1
carbon source D-(+)-Galactosamine (C) 10 mM N.D. N.D. +0.2 -0.1 -0.7
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM N.D. N.D. +0.2 -0.6 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct N.D. N.D. -0.0 +0.2 -0.8
carbon source octanoate (C) N.D. N.D. -0.1 +0.2 -0.6
carbon source L-Lactate (C) 10 mM N.D. N.D. +0.3 -0.7 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. -0.1 +0.4 -0.7
carbon source L-Phenylalanine carbon 5 mM N.D. N.D. +0.0 +0.3 -0.6
carbon source NAG (C) 10 mM N.D. N.D. +0.0 -0.7 +0.4
carbon source butyrate (C) N.D. N.D. -0.2 -0.3 +0.5
carbon source trans-aconitic (C) 5 mM N.D. N.D. +0.1 -0.4 +0.4
carbon source Inosine (C) N.D. N.D. +0.2 +0.3 -0.4
carbon source 4-Guanidinobutyric (C) N.D. N.D. +0.3 +0.3 -0.4
carbon source L-Lactate (C) N.D. N.D. +0.2 -0.5 +0.4
carbon source Cytidine (C) N.D. N.D. +0.1 +0.6 -0.4
carbon source Quinic Acid (C) 10 mM N.D. N.D. +0.1 -0.4 +0.5
carbon source Xanthosine (C) N.D. N.D. -0.1 -0.1 +0.7
carbon source butyrate (C) N.D. N.D. -0.2 +0.5 +0.3
carbon source Betaine (C) N.D. N.D. -0.3 +0.5 +0.5
carbon source p-Coumaric (C) N.D. N.D. +0.1 +0.4 +0.3
carbon source D,L-Malic Acid (C) 10 mM N.D. N.D. +0.2 +0.3 +0.4
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM N.D. N.D. -0.1 +0.5 +0.5
carbon source octanoate (C) N.D. N.D. -0.1 +0.5 +0.5
carbon source butyrate (C) N.D. N.D. +0.1 +0.5 +0.4
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PFR28_00574
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PFR28_00575
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PFR28_00578
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