Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00565 and PFR28_00566 are separated by 116 nucleotidesPFR28_00566 and PFR28_00567 are separated by 235 nucleotidesPFR28_00567 and PFR28_00568 overlap by 8 nucleotidesPFR28_00568 and PFR28_00569 are separated by 2 nucleotides PFR28_00565: PFR28_00565 - Sulfoquinovose isomerase, at 604,993 to 606,252 _00565 PFR28_00566: PFR28_00566 - putative sugar-binding periplasmic protein, at 606,369 to 607,670 _00566 PFR28_00567: PFR28_00567 - Melibiose/raffinose/stachyose import permease protein MelD, at 607,906 to 608,814 _00567 PFR28_00568: PFR28_00568 - Diacetylchitobiose uptake system permease protein NgcG, at 608,807 to 609,652 _00568 PFR28_00569: PFR28_00569 - sn-glycerol-3-phosphate import ATP-binding protein UgpC, at 609,655 to 610,815 _00569
Group Condition PFR28_00565 PFR28_00566 PFR28_00567 PFR28_00568 PFR28_00569
carbon source D-Mannose carbon 10 mM -5.5 -4.3 -2.5 -2.6 -2.4
carbon source D-Mannose carbon 10 mM -5.3 -4.9 -2.5 -2.3 -2.1
carbon source D-Mannose carbon 10 mM -4.4 -4.4 -2.3 -2.3 -2.3
carbon source D(+)-Glucuronic carbon 10 mM -0.2 -2.3 -2.8 -3.0 -3.1
carbon source D-Trehalose (C) 5 mM -0.3 -2.9 -2.9 -2.2 -2.9
carbon source D-Trehalose (C) 5 mM -0.1 -2.4 -3.1 -2.7 -2.7
carbon source D-Trehalose (C) 5 mM -0.0 -3.3 -2.1 -3.0 -2.7
carbon source D(+)-Glucuronic carbon 10 mM -0.2 -2.6 -2.7 -2.6 -2.8
carbon source D(+)-Glucuronic carbon 10 mM -0.2 -2.4 -2.7 -2.8 -2.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.0 -0.7 -0.9 -0.6 -0.9
carbon source D-Glucose (C) 10 mM -0.1 -0.4 -0.5 -0.6 -0.6
carbon source D-Xylose (C) 10 mM +0.0 -0.6 -0.3 -0.5 -0.8
carbon source D-Glucose (C) 10 mM -0.2 -0.3 -0.4 -0.5 -0.4
carbon source D-Xylose (C) 10 mM -0.1 -0.4 -0.3 -0.3 -0.4
carbon source D-Xylose (C) 10 mM -0.1 -0.3 -0.4 -0.2 -0.5
stress D-Glucose (C); with Chloride 400 mM -0.1 -0.1 -0.3 -0.4 -0.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 +0.2 -0.5 -0.6 -0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.3 +0.2 -0.1 -0.6 -0.3
carbon source m-Inositol (C) 10 mM +0.1 +0.7 +0.2 +0.3 +0.2
carbon source m-Inositol (C) 10 mM +0.1 +0.6 +0.4 +0.1 +0.3
carbon source m-Inositol carbon 10 mM -0.1 +0.6 +0.5 +0.3 +0.3
carbon source m-Inositol (C) 10 mM +0.0 +0.7 +0.4 +0.3 +0.3
carbon source m-Inositol carbon 10 mM +0.1 +0.5 +0.4 +0.4 +0.5
carbon source D-Galactose (C) 10 mM -0.1 +1.2 +1.0 +0.8 +0.8
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.1 +3.0 +2.9 +2.7 +2.8
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.1 +3.1 +3.1 +2.9 +3.0
carbon source D-Glucosamine Hydrochloride carbon 10 mM -0.2 +3.2 +3.2 +2.9 +3.3
carbon source D-Glucosamine Hydrochloride (C) 10 mM -0.1 +3.4 +3.3 +3.0 +3.2
carbon source D-Glucosamine Hydrochloride carbon 10 mM -0.1 +3.3 +3.3 +3.1 +3.4
carbon source D-Glucosamine Hydrochloride carbon 10 mM +0.1 +3.4 +3.3 +3.1 +3.5
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