Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00544 and PFR28_00545 are separated by 87 nucleotidesPFR28_00545 and PFR28_00546 are separated by 162 nucleotidesPFR28_00546 and PFR28_00547 are separated by 7 nucleotidesPFR28_00547 and PFR28_00548 are separated by 234 nucleotides PFR28_00544: PFR28_00544 - Putative multidrug resistance protein MdtD, at 579,736 to 581,238 _00544 PFR28_00545: PFR28_00545 - p-hydroxybenzoate hydroxylase, at 581,326 to 582,516 _00545 PFR28_00546: PFR28_00546 - HTH-type transcriptional activator RhaS, at 582,679 to 583,572 _00546 PFR28_00547: PFR28_00547 - hypothetical protein, at 583,580 to 583,756 _00547 PFR28_00548: PFR28_00548 - hypothetical protein, at 583,991 to 584,350 _00548
Group Condition PFR28_00544 PFR28_00545 PFR28_00546 PFR28_00547 PFR28_00548
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.0 -2.8 -4.1 -2.9 -0.4
carbon source p-Coumaric (C) 2.5 mM +0.0 -2.7 -3.8 -3.0 -0.2
carbon source p-Coumaric (C) 2.5 mM -0.0 -2.2 -3.0 -3.2 -0.3
carbon source p-Coumaric (C) 2.5 mM -0.0 -2.2 -3.0 -2.9 -0.3
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM +0.0 -2.1 -2.9 -2.3 -0.4
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.0 -1.7 -2.1 -3.2 -0.3
carbon source p-Coumaric (C) -0.2 -3.0 -4.2 -0.0 +0.0
carbon source p-Coumaric (C) -0.2 -4.0 -2.8 -0.3 +0.1
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -0.1 -1.2 -1.8 -3.5 -0.3
carbon source p-Coumaric (C) +0.0 -3.0 -2.5 -0.7 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.6 -1.2 -1.8 -2.5 +0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.2 -0.9 -1.8 -3.0 -0.6
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.2 -0.9 -1.6 -1.8 -0.6
carbon source methyl-trans-p-coumarate (C) +0.0 -1.9 -2.5 -0.3 -0.0
carbon source Vanillic Acid (C) 2.5 mM -0.1 +0.6 -0.1 -3.5 -0.8
carbon source Vanillic Acid (C) 2.5 mM -0.0 +0.5 -0.4 -3.6 -0.2
carbon source caffeic (C) 2.5 mM -0.1 +0.0 -0.4 -2.7 -0.4
carbon source Ferulic Acid (C) 2.5 mM +0.1 +0.3 -0.5 -2.9 -0.4
carbon source methyl-trans-p-coumarate (C) +0.1 -1.7 -2.0 +0.2 +0.1
carbon source Ferulic Acid (C) 2.5 mM +0.0 +0.2 -0.4 -2.8 -0.2
carbon source Ferulic Acid (C) 2.5 mM +0.1 +0.2 -0.3 -2.8 -0.3
carbon source caffeic (C) 2.5 mM +0.1 +0.0 -0.5 -2.7 -0.0
carbon source methyl-trans-p-coumarate (C) +0.3 -1.7 -2.0 +0.3 +0.2
carbon source caffeic (C) 2.5 mM -0.0 +0.1 -0.5 -2.4 -0.2
carbon source Vanillic Acid (C) 2.5 mM +0.3 +0.7 -0.1 -3.2 -0.4
carbon source Betaine (C) -0.1 +0.3 +0.1 -0.9 +0.4
carbon source Xanthosine (C) 10 mM -0.2 -0.3 +0.8 +0.4 -0.1
carbon source D-Trehalose (C) 5 mM +0.1 -0.1 +1.0 +0.3 -0.3
carbon source D-Glucuronic (C) 10 mM -0.2 +0.4 -0.2 +0.7 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.0 +0.3 +1.1 +0.6 -0.0
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