Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00429 and PFR28_00430 are separated by 467 nucleotidesPFR28_00430 and PFR28_00431 are separated by 480 nucleotidesPFR28_00431 and PFR28_00432 are separated by 670 nucleotidesPFR28_00432 and PFR28_00433 are separated by 85 nucleotides PFR28_00429: PFR28_00429 - DNA mismatch repair protein MutS, at 470,110 to 472,689 _00429 PFR28_00430: PFR28_00430 - IS110 family transposase ISPfl1, at 473,157 to 474,179 _00430 PFR28_00431: PFR28_00431 - HTH-type transcriptional regulator PrtR, at 474,660 to 475,394 _00431 PFR28_00432: PFR28_00432 - hypothetical protein, at 476,065 to 476,709 _00432 PFR28_00433: PFR28_00433 - hypothetical protein, at 476,795 to 477,223 _00433
Group Condition PFR28_00429 PFR28_00430 PFR28_00431 PFR28_00432 PFR28_00433
carbon source L-Lactate (C) 10 mM -0.0 N.D. N.D. -0.1 -1.0
carbon source L-Lactate (C) -0.1 N.D. N.D. -0.1 -0.5
carbon source Guanosine (C) -0.1 N.D. N.D. +0.0 -0.6
carbon source D(+)-Glucuronic carbon 10 mM -0.2 N.D. N.D. -0.2 -0.3
carbon source methyl ferulate (C) +0.0 N.D. N.D. -0.4 -0.2
carbon source Inosine (C) -0.1 N.D. N.D. +0.1 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct +0.2 N.D. N.D. -0.2 -0.3
carbon source L-Hydroxyproline (C) 10 mM -0.1 N.D. N.D. -0.3 +0.1
carbon source Cytidine (C) +0.1 N.D. N.D. +0.2 -0.6
carbon source L-Lactate (C) 10 mM -0.0 N.D. N.D. +0.1 -0.4
carbon source Inosine (C) -0.2 N.D. N.D. +0.2 -0.4
carbon source methyl-trans-p-coumarate (C) +0.2 N.D. N.D. -0.0 -0.4
carbon source methyl ferulate (C) +0.1 N.D. N.D. +0.1 -0.4
carbon source D-Glucosamine Hydrochloride (C) 10 mM +0.2 N.D. N.D. -0.3 -0.1
carbon source D-(+)-Galactosamine (C) 10 mM +0.3 N.D. N.D. -0.2 -0.2
carbon source L-Carnitine 10 mM (C) -0.1 N.D. N.D. -0.2 +0.3
carbon source octanoate (C) +0.1 N.D. N.D. +0.2 -0.3
carbon source methyl-trans-p-coumarate (C) +0.4 N.D. N.D. +0.1 -0.5
carbon source L-Carnitine 10 mM (C) +0.0 N.D. N.D. -0.3 +0.3
carbon source methyl ferulate (C) +0.1 N.D. N.D. +0.3 -0.3
carbon source Guanosine (C) -0.4 N.D. N.D. +0.5 -0.0
carbon source Betaine (C) -0.0 N.D. N.D. +0.4 -0.2
carbon source Guanosine (C) -0.1 N.D. N.D. +0.5 -0.2
carbon source D-Glucosamine Hydrochloride carbon 10 mM +0.2 N.D. N.D. -0.2 +0.2
carbon source L-Carnitine (C) 10 mM +0.1 N.D. N.D. -0.1 +0.3
carbon source p-Coumaric (C) 2.5 mM -0.0 N.D. N.D. +0.2 +0.4
carbon source L-Phenylalanine carbon 5 mM +0.1 N.D. N.D. +0.2 +0.3
carbon source Inosine carbon 10 mM +0.6 N.D. N.D. +0.3 +0.2
carbon source Inosine carbon 10 mM +0.9 N.D. N.D. +0.1 +0.1
carbon source Inosine carbon 10 mM +1.3 N.D. N.D. +0.4 -0.2
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PFR28_00429
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PFR28_00430
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PFR28_00433
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