Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00403 and PFR28_00404 are separated by 74 nucleotidesPFR28_00404 and PFR28_00405 are separated by 45 nucleotidesPFR28_00405 and PFR28_00406 are separated by 3 nucleotidesPFR28_00406 and PFR28_00407 are separated by 107 nucleotides PFR28_00403: PFR28_00403 - Regulator of sigma-E protease RseP, at 440,486 to 441,838 _00403 PFR28_00404: PFR28_00404 - Outer membrane protein assembly factor BamA, at 441,913 to 444,288 _00404 PFR28_00405: PFR28_00405 - hypothetical protein, at 444,334 to 444,837 _00405 PFR28_00406: PFR28_00406 - UDP-3-O-acylglucosamine N-acyltransferase, at 444,841 to 445,896 _00406 PFR28_00407: PFR28_00407 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, at 446,004 to 446,444 _00407
Group Condition PFR28_00403 PFR28_00404 PFR28_00405 PFR28_00406 PFR28_00407
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM -4.1 N.D. -6.0 N.D. N.D.
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -4.4 N.D. -5.7 N.D. N.D.
carbon source caffeic (C) 2.5 mM -3.2 N.D. -4.6 N.D. N.D.
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -5.2 N.D. -1.9 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -3.9 N.D. -2.5 N.D. N.D.
carbon source caffeic (C) 2.5 mM -3.2 N.D. -2.5 N.D. N.D.
carbon source caffeic (C) 2.5 mM -2.9 N.D. -2.3 N.D. N.D.
carbon source L-Carnitine (C) 10 mM -3.8 N.D. -1.3 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -3.8 N.D. -1.2 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -2.1 N.D. -2.5 N.D. N.D.
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -2.9 N.D. -1.4 N.D. N.D.
carbon source propionate carbon 20 mM -3.6 N.D. -0.7 N.D. N.D.
carbon source D-Trehalose (C) 5 mM -2.4 N.D. -1.6 N.D. N.D.
carbon source propionate carbon 20 mM -2.7 N.D. -1.3 N.D. N.D.
carbon source L-Hydroxyproline carbon 10 mM -4.3 N.D. +1.1 N.D. N.D.
carbon source L-Hydroxyproline carbon 10 mM -4.4 N.D. +1.5 N.D. N.D.
carbon source L-Hydroxyproline carbon 10 mM -4.1 N.D. +1.3 N.D. N.D.
carbon source D-Glucosamine Hydrochloride carbon 10 mM -3.4 N.D. +1.4 N.D. N.D.
carbon source L-Arginine (C) 10 mM -3.0 N.D. +1.1 N.D. N.D.
carbon source sn-glycero-3-phosphocholine (C) -3.1 N.D. +1.2 N.D. N.D.
carbon source D-Glucosamine Hydrochloride carbon 10 mM -3.9 N.D. +2.1 N.D. N.D.
carbon source Choline chloride (C) -2.7 N.D. +1.2 N.D. N.D.
carbon source D-Glucosamine Hydrochloride carbon 10 mM -3.3 N.D. +2.1 N.D. N.D.
carbon source caffeic (C) -2.6 N.D. +1.6 N.D. N.D.
carbon source m-Inositol carbon 10 mM -2.4 N.D. +1.6 N.D. N.D.
carbon source sn-glycero-3-phosphocholine (C) -2.9 N.D. +2.2 N.D. N.D.
carbon source Cytidine (C) -2.3 N.D. +1.7 N.D. N.D.
carbon source Choline chloride (C) -2.3 N.D. +2.0 N.D. N.D.
carbon source p-Coumaric (C) -1.7 N.D. +2.3 N.D. N.D.
carbon source p-Coumaric (C) -1.0 N.D. +3.3 N.D. N.D.
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