Fitness for 5 genes in Pseudomonas sp. RS175

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500 ntPFR28_00388 and PFR28_00389 overlap by 4 nucleotidesPFR28_00389 and PFR28_00390 are separated by 74 nucleotidesPFR28_00390 and PFR28_00391 are separated by 33 nucleotidesPFR28_00391 and PFR28_00392 are separated by 296 nucleotides PFR28_00388: PFR28_00388 - Cysteine desulfuration protein SufE, at 424,110 to 424,514 _00388 PFR28_00389: PFR28_00389 - Cysteine desulfurase SufS, at 424,511 to 425,716 _00389 PFR28_00390: PFR28_00390 - 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, at 425,791 to 426,825 _00390 PFR28_00391: PFR28_00391 - hypothetical protein, at 426,859 to 427,221 _00391 PFR28_00392: PFR28_00392 - Sodium, potassium, lithium and rubidium/H(+) antiporter, at 427,518 to 429,164 _00392
Group Condition PFR28_00388 PFR28_00389 PFR28_00390 PFR28_00391 PFR28_00392
carbon source Betaine (C) -0.7 -0.4 N.D. -1.1 -0.7
carbon source acetate carbon 10 mM -0.2 -0.2 N.D. -0.4 -1.0
carbon source Inosine (C) -0.5 -0.6 N.D. -0.5 +0.1
carbon source D,L-Lactate carbon 20 mM -0.2 -0.2 N.D. -0.8 -0.2
carbon source propionate carbon 20 mM -0.5 -0.4 N.D. -0.4 -0.0
carbon source Choline (C) 10 mM -0.5 -0.2 N.D. -0.0 -0.6
carbon source D-Galactose carbon 10 mM -0.4 -0.2 N.D. -0.6 -0.1
carbon source L-pyroglutamic carbon 10 mM -0.1 -0.2 N.D. -0.7 -0.4
carbon source Shikimic Acid (C) 10 mM -0.6 +0.1 N.D. -0.5 -0.2
carbon source D-Galactose (C) 10 mM -0.4 -0.4 N.D. -0.6 +0.1
carbon source acetate carbon 10 mM +0.0 -0.0 N.D. -0.4 -0.7
carbon source butyrate (C) 10 mM -0.2 +0.2 N.D. -0.5 -0.5
carbon source 5-Aminovaleric carbon 10 mM -0.2 +0.2 N.D. -0.6 -0.4
carbon source butyrate (C) 10 mM -0.5 +0.2 N.D. -0.4 -0.1
carbon source Choline (C) 10 mM -0.8 -0.2 N.D. +0.1 +0.2
carbon source L-Phenylalanine 5 mM (C) +0.3 +0.1 N.D. -0.7 -0.2
carbon source 4-Acetoxy-3-methoxycinnamic (C) -0.7 +0.2 N.D. -0.2 +0.3
carbon source L-Lactate (C) 10 mM -0.6 -0.4 N.D. +0.8 -0.2
carbon source Cytidine (C) -0.9 +0.1 N.D. +0.5 -0.0
carbon source L-Carnitine 10 mM (C) +0.3 -0.0 N.D. -0.7 +0.2
carbon source methyl-trans-p-coumarate (C) -0.3 -0.4 N.D. +0.1 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.1 +0.7 N.D. -0.1 -0.5
carbon source Choline chloride (C) -0.7 -0.2 N.D. +0.4 +0.5
carbon source Cytidine (C) -0.6 +0.2 N.D. -0.1 +0.6
carbon source Trisodium citrate 10 mM (C) +0.3 +0.3 N.D. -0.4 +0.3
carbon source L-Carnitine 10 mM (C) +0.6 +0.1 N.D. -0.3 +0.2
carbon source L-Hydroxyproline (C) 10 mM +0.4 +0.1 N.D. +0.7 -0.2
carbon source sn-glycero-3-phosphocholine (C) +0.5 -0.3 N.D. +0.4 +0.5
carbon source Inosine carbon 10 mM +0.4 +0.3 N.D. +0.2 +0.4
carbon source Glycocyamine 20 mM (C) +0.3 +0.1 N.D. -0.0 +1.1
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PFR28_00388
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PFR28_00392
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