Fitness for 5 genes in Pseudomonas sp. RS175

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 385 experiments or choose conditions or try the comparative fitness browser

500 ntPFR28_00262 and PFR28_00263 are separated by 166 nucleotidesPFR28_00263 and PFR28_00264 overlap by 1 nucleotidesPFR28_00264 and PFR28_00265 are separated by 1 nucleotidesPFR28_00265 and PFR28_00266 overlap by 17 nucleotides PFR28_00262: PFR28_00262 - hypothetical protein, at 288,964 to 290,130 _00262 PFR28_00263: PFR28_00263 - HTH-type transcriptional activator RhaR, at 290,297 to 291,130 _00263 PFR28_00264: PFR28_00264 - Sensor histidine kinase RcsC, at 291,130 to 293,532 _00264 PFR28_00265: PFR28_00265 - Pesticin receptor, at 293,534 to 295,903 _00265 PFR28_00266: PFR28_00266 - hypothetical protein, at 295,887 to 296,972 _00266
Group Condition PFR28_00262 PFR28_00263 PFR28_00264 PFR28_00265 PFR28_00266
carbon source Guanosine (C) -0.0 -0.3 -0.4 -0.3 -0.1
carbon source L-tyrosine (C) 10 mM -0.2 -0.6 +0.3 +0.0 -0.3
carbon source propionate carbon 20 mM -0.1 -0.5 +0.1 -0.1 -0.1
carbon source Inosine (C) +0.0 -0.7 -0.1 -0.0 +0.2
carbon source Cytidine (C) +0.1 -0.2 -0.2 -0.2 -0.2
carbon source sn-glycero-3-phosphocholine (C) +0.2 -0.3 -0.3 -0.2 -0.0
carbon source L-Lactate (C) 10 mM +0.2 -0.6 +0.2 -0.2 -0.1
carbon source 4-Hydroxybenzoic Acid (C) 2.5 mM -0.0 -0.5 +0.2 -0.2 +0.1
carbon source Betaine (C) 2.5 mM +0.1 -0.4 -0.2 +0.2 -0.3
carbon source L-Leucine (C) 10 mM +0.1 -0.9 +0.3 +0.1 -0.1
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.0 -0.6 +0.2 +0.1 -0.1
carbon source Vanillic Acid (C) 2.5 mM +0.1 -0.4 +0.2 -0.1 -0.1
carbon source Cytidine (C) -0.0 +0.1 -0.2 -0.4 +0.3
carbon source Methyl 3-(4-hydroxyphenyl)propionate (C) 2.5 mM +0.0 -0.3 +0.2 +0.2 -0.4
carbon source Vanillic Acid (C) 2.5 mM -0.1 -0.4 +0.2 +0.2 +0.0
carbon source L-Carnitine (C) +0.2 -0.4 -0.1 +0.0 +0.2
carbon source Vanillic Acid (C) 2.5 mM -0.2 -0.3 +0.4 -0.1 +0.1
carbon source methyl ferulate (C) -0.1 -0.4 +0.1 +0.2 +0.2
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM -0.1 -0.1 +0.2 -0.2 +0.2
carbon source methyl-trans-p-coumarate (C) -0.0 +0.5 -0.1 -0.1 -0.1
carbon source Guanosine (C) -0.1 +0.6 -0.1 -0.0 -0.2
carbon source butyrate (C) +0.2 -0.3 +0.1 -0.1 +0.4
carbon source p-Coumaric (C) +0.1 +0.6 -0.1 +0.0 -0.4
carbon source Inosine carbon 10 mM -0.1 +0.5 +0.1 -0.3 +0.1
carbon source butyrate (C) 10 mM -0.1 +0.5 -0.1 +0.2 -0.1
carbon source octanoate (C) +0.3 +0.2 +0.1 -0.2 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root_top; GrowthSubstrate=calcine_clay; Collection=Direct -0.1 +0.5 +0.2 -0.1 +0.0
carbon source 2-Keto-D-gluconic hemicalcium salt (C) 10 mM +0.1 +0.1 +0.1 +0.0 +0.5
carbon source 4-Hydroxyphenylpropionic (C) 2.5 mM +0.1 +0.2 +0.2 +0.2 +0.2
carbon source sn-glycero-3-phosphocholine (C) +0.3 +0.6 +0.1 +0.0 +0.1
remove
PFR28_00262
plot		 remove
PFR28_00263
plot		 remove
PFR28_00264		 remove
PFR28_00265
plot		 remove
PFR28_00266
plot